Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0886 ATGAAGAAGGTGAGAAGAAAGATCGGGAAGTATGAAGTTGGTAGAACTATTGGTGAAGGTACATTCGCGAAGGTGAAGTTCGCAAAACACAGTGATACAGGGGAAAGTGTGGCTATTAAAGTCATGGCTAAGAGTACCATTCTCAAGCACAGAATGGTTGAACAGATTAAAAGAGAGATATCCATTATGAAGATTGTCAGGCACCCTAATATAGTCAGATTGCACGAGGTTTTGGCCAGTGAGACCAAGATCTACATAATTCTGGAGTTTGTGATGGGAGGGGAATTATATGATCAAATTGTTCAGCAGGGCGATGATCTTCTTCACACCACATGTGGGACCCCAAATTATGTTGCCCCTGAGGTGCTCAGCAATCAAGGTTATGATGGTGCCGCAGCTGATGTATGGTCATGTGGAGTCATTCTATATGTTCTAATGGCTGGATATCTTCCATTTGAGGAGGCAGACCTTCCGACCTTGTTCAGAAGGATCAGTGCTGCAGAATTTGTTTGCCCACTCTGGTTTCCTGCTGGTGCAAAGGCACTGATACATAAAATTTTGGATCCTAATCCTAAAACACGTATGAAAATAAAAGAAATAAAGCAAGATCCATGGTTCCGGAAAAACTATTATCCTGTCAAACTCAGAGAAGACGAGAAAGTGAACTTGGACGACGTTCAGGCTGTTTTTGATGATATTGAGGACCGGTATGTTTCTGAACGGTCACAAATTAACGAGGGAGGTCCTTTGATAATGAATGCATTTGAGATGATAACCTTATCACAAGGGTTGAATCTTTCACCACTATTTGACAGGCATCAGGATTATGTAAAACGGCAGACTCGTTTTGTTTCACGTAAACCAGCAAAAGTTATAATTTCATCTATTGAAGCTGTTGCAGAGTCAATGGGTGTTAAGGTCCACTCTCGCAATTACAAGATGAGGATTGAAAGAGTTTCTTCAAATAAGGTTGGGCAATTTGCAGTGGTCTTGGAGGTGTTTGAAGTCGCACCCTCCCTTTTCATGGTAGATGTTCGAAAGGCAGCTGGGGATACTCTTGAGTATCACAAGTTCTACAAGAACCTATGTGCGAAGCTAGAAAGCATTATTTGGAGACCGGGCGAGACTAGCCTAGATTCTGGTTTGCTTCGACAAATGACATTCTGA 1167 0.4207 MKKVRRKIGKYEVGRTIGEGTFAKVKFAKHSDTGESVAIKVMAKSTILKHRMVEQIKREISIMKIVRHPNIVRLHEVLASETKIYIILEFVMGGELYDQIVQQGDDLLHTTCGTPNYVAPEVLSNQGYDGAAADVWSCGVILYVLMAGYLPFEEADLPTLFRRISAAEFVCPLWFPAGAKALIHKILDPNPKTRMKIKEIKQDPWFRKNYYPVKLREDEKVNLDDVQAVFDDIEDRYVSERSQINEGGPLIMNAFEMITLSQGLNLSPLFDRHQDYVKRQTRFVSRKPAKVIISSIEAVAESMGVKVHSRNYKMRIERVSSNKVGQFAVVLEVFEVAPSLFMVDVRKAAGDTLEYHKFYKNLCAKLESIIWRPGETSLDSGLLRQMTF* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0886 388 PANTHER - 4 104 - -
Psa4g0886 388 PANTHER - 103 380 - -
Psa4g0886 388 Gene3D Kinase associated domain 1, KA1 251 372 - -
Psa4g0886 388 Pfam NAF domain 249 308 IPR004041 GO:0007165
Psa4g0886 388 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Psa4g0886 388 CDD CIPK_C 253 363 - -
Psa4g0886 388 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 4 104 - -
Psa4g0886 388 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 103 380 - -
Psa4g0886 388 Pfam Protein kinase domain 106 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0886 388 Pfam Protein kinase domain 11 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0886 388 Gene3D Transferase(Phosphotransferase) domain 1 102 250 - -
Psa4g0886 388 ProSiteProfiles NAF domain profile. 247 271 IPR018451 GO:0007165
Psa4g0886 388 ProSitePatterns Protein kinases ATP-binding region signature. 17 49 IPR017441 GO:0005524
Psa4g0886 388 SUPERFAMILY Protein kinase-like (PK-like) 8 244 IPR011009 -
Psa4g0886 388 ProSiteProfiles Protein kinase domain profile. 11 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0886 Psa-Chr4 59122126 59135898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0886 1 314 CBL-interacting serine-threonine protein kinases AT5G35410 61.022 6.92e-163 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Psa4g0886 Pkinase 1.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0886 - - gmx:100811380 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0886 4 59122126 59135898 Psa4g0886 4 59122126 59135898 ECH