Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0866 ATGACACACACCAATAAAAACATGTTTCAAATAAAAAACATGACAATTCTCATTCTAATCATTGTGGTTGCAGCGTCACTACAAACCTCAGAAGCTGAAGATTACACAGTAGGAGGAGACACCATAGGATGGACTAGTTTTCCACCTGGTGGTTCTTCTTTCTATTCAAATTGGGCTTCAAATTTTACATTCAAATTAAACGACAATCTAGTGTTCAACTATGAATCTGGAAGCCACAGCGTCGTTATATTAAACAAAGCTAACTATGAAAAGTGTAACGTGAATGATGATATTCAAACCTTTAACAAAGGACCAACCAAAATAACCTTAGATCGAAGTGGTGATTTCTACTTTATCTGTAGTTTATCAGGTCATTGCAGCAGTGGACAAAAGCTAAGTGTTAAAGTCACAGAAACTGCTTCTTCTGATGTTCCACTTCCACCTGCTGAAGCTCCATCATCCCTAGGTACTGGAGCAGGTTCAGCCACAACCGAGACTGCTGCTACCTTCACTCTTCTCCTTGTTACTATTGCCTTCAATTTTTTCTCCCAATTTTAA 558 0.3835 MTHTNKNMFQIKNMTILILIIVVAASLQTSEAEDYTVGGDTIGWTSFPPGGSSFYSNWASNFTFKLNDNLVFNYESGSHSVVILNKANYEKCNVNDDIQTFNKGPTKITLDRSGDFYFICSLSGHCSSGQKLSVKVTETASSDVPLPPAEAPSSLGTGAGSATTETAATFTLLLVTIAFNFFSQF* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0866 185 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 9 173 - -
Psa4g0866 185 PANTHER BLUE COPPER PROTEIN 9 173 IPR039391 GO:0009055
Psa4g0866 185 SUPERFAMILY Cupredoxins 32 136 IPR008972 -
Psa4g0866 185 Gene3D - 32 146 IPR008972 -
Psa4g0866 185 Pfam Plastocyanin-like domain 53 130 IPR003245 GO:0009055
Psa4g0866 185 ProSiteProfiles Phytocyanin domain profile. 33 138 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0866 Psa-Chr4 56605710 56606744 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0866 17 172 Phytocyanin Superfamily AT2G25060 37.179 4.22e-27 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0866 - - mtr:MTR_4g114830 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0866 4 56605710 56606744 Psa4g0866 4 56605710 56606744 ECH