Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0834 ATGGATTATACTGTTTTGTTGTTGGTGATATTGTTGCAATTGTCAACAGTTTTTGGGTCTGGAGATGTTTTACAGACAAAGGATTGTGGCGATAATTCGGTAGCGAGTTCGATTTCTAGTCATGGTGAGGAATTGTTTTACTTAAATGGGAATGTTGTGAACAAAGTTGGTTTCTGTAAAGCTCTGAAATTGTATATTGCAAACGGTTGTGATGTGAATGACTACTTTGAAAGCAATCACTGTGTTTTGGATTTGGATTTGGATTTAGATGTCTCTTTTGTGAATTTGCCTTCAAAGGGGGGAAGGAAACTTTTGCAGAAAGGTTTGAACAATAATTCCACATCACAAGGAGATTCTAAGCATGTGTCAAGCAACCATGTTGGAATTTTTGTAGGTGGAGCTTTGTTGGTATGTTGTGCTGTTGTTTGTCCTTGTTTCTATGGGAAGAGAAGGAAGACAACCGCTCATGCTGTTCTGGAAAAGGACTCAAATTCAAGACATGCTATGAATTCGGAAGAGAGGAAGGTGGATTTAGCTTCCTCCTTTGAACCATCTGTTTCCGATAAGATCCCGTCTAGTCCACTTCGGGTGCCACAAAGTCCATCAAGATTCTCAATGTCTCCGAAACTCAGTAGACTTCAATCATTACATCTCAACCTGAGTCAGGTTTCTAAAGCCACCCGTAATTTCTCAGAAACATTACAAATAGGAGAGGGAGGTTTTGGAACTGTCTACAAGGCTAATTTAGATGATGGCCGGGTCGTGGCTGTAAAACGCGCAAAAAGGGAACATTTTGAGAGTTTGAGGACAGAATTCAGCAGTGAAGTCGAACTTCTGGCCAAAATTGATCATCGAAACCTGGTGAAACTACTTGGTTATATTGACAAAGGAAACGAACGTATCCTTATTACAGAGTTTGTGCCAAATGGTACTCTTCGAGAACATTTGGATGGTTTGTTTGGAAAAATCCTGGATTTCAATCAGCGGCTTGAAATTGCAATTGATGTTGCTCATGGATTGACCTATTTGCATCTGTATGCCGGTCAGTATCCCTTCATTCTTTATTATGCAAAGTCTGTTCACATTCTACATTTTCATTGTACAAAACCAAATATAAAATGCAGACTGCGTCTTAGATACTATAAACAGATGCTGTGA 1158 0.3938 MDYTVLLLVILLQLSTVFGSGDVLQTKDCGDNSVASSISSHGEELFYLNGNVVNKVGFCKALKLYIANGCDVNDYFESNHCVLDLDLDLDVSFVNLPSKGGRKLLQKGLNNNSTSQGDSKHVSSNHVGIFVGGALLVCCAVVCPCFYGKRRKTTAHAVLEKDSNSRHAMNSEERKVDLASSFEPSVSDKIPSSPLRVPQSPSRFSMSPKLSRLQSLHLNLSQVSKATRNFSETLQIGEGGFGTVYKANLDDGRVVAVKRAKREHFESLRTEFSSEVELLAKIDHRNLVKLLGYIDKGNERILITEFVPNGTLREHLDGLFGKILDFNQRLEIAIDVAHGLTYLHLYAGQYPFILYYAKSVHILHFHCTKPNIKCRLRLRYYKQML* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0834 385 ProSiteProfiles Protein kinase domain profile. 230 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0834 385 PANTHER NODULATION RECEPTOR KINASE-LIKE PROTEIN 14 363 - -
Psa4g0834 385 Gene3D Transferase(Phosphotransferase) domain 1 209 377 - -
Psa4g0834 385 SUPERFAMILY Protein kinase-like (PK-like) 212 344 IPR011009 -
Psa4g0834 385 Pfam Protein tyrosine and serine/threonine kinase 235 344 IPR001245 GO:0004672|GO:0006468
Psa4g0834 385 PANTHER OS07G0166700 PROTEIN 14 363 IPR045272 GO:0004714|GO:0006468
Psa4g0834 385 ProSitePatterns Protein kinases ATP-binding region signature. 236 258 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0834 Psa-Chr4 52760471 52763364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0834 126 363 Receptor kinase-like Gene Family AT3G46290 34.836 2.56e-30 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Psa4g0834 PK_Tyr_Ser-Thr 2.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0834 - - aprc:113845864 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0834 4 52760471 52763364 Psa4g0834 4 52760471 52763364 ECH