Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0805 ATGGGAGCAGTTATTCTCCCAGATCTCGGTACCGAGATTTTGATTCCCGTTTGCGCCGTCATTGGAATCGCTTTTGCCCTTTTTCAATGGCTTCTGGTTTCCAAGGTTAAGCTCACCGCTGGAAGAGATACTGCTCCTGAAACACCGGGGAAGAATGGGTACAACGATTCACTCATCGAGGAAGAGGAGGGTATCAACGACCACAACGTCGTTCTCAAATGTGCTGAAATCCAGAACGCTATTTCCGAAGGATCAACCTCTTTCCTTTTCACTATGTACAAGTATGTGGGAATCTTCATGGTGGCTTTTGCCATCTTGATATTCCTTTTCCTTGGCTCCGTGGAAGGATTCAGCACAAGCCACCAGCCTTGCACTTATGATGAAACTAAGATGTGTAAGCCGGCTCTTGCCACAGCCATTTTCAGCACCATATCTTTTGTGCTTGGTGGCATCACATCAGTAATTTCTGGTTTCCTTGGAATGAAAATTGCCACCTATGCCAATGCAAGAACCACCCTGGAGGCAAGAAAGGGTGTTGGGAAAGCTTTCATTACCGCATTCAGATCTGGTGCAGTTATGGGATTTCTCCTTGCTGCCAATGGTCTTTTGGTTCTTTACATTACCATCAACCTGTTCAAGATTTACTATGGTGATGACTGGGGTGGTCTTTTTGAGGCTATCACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTTTGTTTGGAAGAGTTGGTGGAGGTATCTATACTAAGGCTGCTGATGTTGGTGCCGATCTTGTCGGCAAGGTTGAAAGAAACATTCCTGAGGATGATCCAAGGAATCCAGCTGTTATTGCTGATAATGTTGGTGATAATGTTGGTGATATTGCCGGTATGGGATCCGATCTATTTGGTTCATATGCAGAGGCATCTTGTGCTGCCCTTGTTGTTCTCCATCTCTTCTTTGGGATAAATCATGAGTTCACTGCATTGGATAGCACTCCCATCTACCTCACCATCTTCAATTTTGGAGAGCAGAAAGTTGTCAAGAACTGGCAGCTATCTTGTGTGTTTCTGTTGGTCTTGGGCAGGCTTATCATTGGATTGTTACTGAATACTATACCAGCAATGCATACAGCCTGTGCAAGATGTGCTGATTCCTGCAGGACTGGTGCTGCTACCATTAATAGCAACGGATTAGCCATCGATGCCTATGGTCCAATCAGTGACAATGCTGAGATTGCCATCTCTGCATCCAACACTGGCGGTGCTTGGGATAATGCCAAGAAGTACATCGAGGCTGGTGCCTCAGAGCATGCAAGAAGCCTAGGTCCAAAAGGGTCAGACCCACACAAGGCAGCAGTTATTGGAGACACCATTGGAGACCCATTGAAGGATACATCTGGACCTTCACTTAACATCCTTATCAAGCTGATGGCAGTTGAGTCACTGGTGTTTGCTCCTTTCTTTGCAACCCACGGTGGTCTCCTCTTCAAGTTTTGGTAA 1482 0.4602 MGAVILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLTAGRDTAPETPGKNGYNDSLIEEEEGINDHNVVLKCAEIQNAISEGSTSFLFTMYKYVGIFMVAFAILIFLFLGSVEGFSTSHQPCTYDETKMCKPALATAIFSTISFVLGGITSVISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYITINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAEASCAALVVLHLFFGINHEFTALDSTPIYLTIFNFGEQKVVKNWQLSCVFLLVLGRLIIGLLLNTIPAMHTACARCADSCRTGAATINSNGLAIDAYGPISDNAEIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKFW* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0805 493 Pfam Inorganic H+ pyrophosphatase 406 478 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa4g0805 493 Pfam Inorganic H+ pyrophosphatase 21 322 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa4g0805 493 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 323 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa4g0805 493 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 403 491 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa4g0805 493 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 326 394 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa4g0805 493 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 326 394 - -
Psa4g0805 493 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 403 491 - -
Psa4g0805 493 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 1 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0805 Psa-Chr4 50257967 50261634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0805 5 404 Primary Pumps ATPases AT1G15690 59.961 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0805 K23025 - gmx:100775864 594.349