Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0780 ATGATCATGGGATATCAAAAGCCTGCATGGTTGGAAGCTCTTTATACAGAAAAGTTCTTTGTTGGTTGTTCTTATCATGAAAATGCAAAAAAGAATGAGAAGAATGTTTGTTGCTTAGATTGTTGTACAAGTATTTGTCCTCATTGTTTGCCGTCTCATCGCTTTCATCGCCTTCTTCAAGTCCGTCGTTACGTTTATCATGATGTTGTTAGATTGGAAGATCTTCAGAAATTAATTGACTGCTCTAACGTTCAGGCCTATACTATCAATAGTGCTAAAGTGGTTTTCATCAAGAAGAGACCTCAAAATCGGCAATTCAAAGGTTCAGGAAACTATTGTACTTCATGTGATAGAAGCCTTCAAGAACCTTTTATTCATTGCTCTCTTGGATGCAAGGTGGATTTTGTGCTGAAACACTACAGGGATCTTTCACCCTACTTAAGGACATGCAACATCCTACAATTAAGTCCTGATTATCTCATTCCACAAGAAATGGGAGAAGAAGAGATAACAAGATCAACAATTGATGAACAAATAAGTTCATATTCAGGATCCTCATCATCATCATCAGGGTCAGAAAATATGAGCATTGCATGCACAGAAATTGTTAGGAAAAGAAGAAGTGGATGGACAAGTATGTGTGCAAAATTCATGGCAAATAATACTATCAATAAAGTTTCTGATGAAGACATGGCTTCAAGTATGATTAGTAGAAGAAAAGGAATCCCTCATAGATCTCCTCTATGTTAG 750 0.3653 MIMGYQKPAWLEALYTEKFFVGCSYHENAKKNEKNVCCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYRDLSPYLRTCNILQLSPDYLIPQEMGEEEITRSTIDEQISSYSGSSSSSSGSENMSIACTEIVRKRRSGWTSMCAKFMANNTINKVSDEDMASSMISRRKGIPHRSPLC* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0780 249 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 249 - -
Psa4g0780 249 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 249 - -
Psa4g0780 249 Pfam PLATZ transcription factor 62 133 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0780 Psa-Chr4 48577202 48579457 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Psa4g0780 PLATZ 4.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0780 - - gmx:100785737 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0780 4 48577202 48579457 Psa4g0780 4 48577202 48579457 ECH