Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0768 ATGGCGTTTGATCAAAATTCCGCTCCTACAGAACTGCGAGTATTGAATGTGGCTCCGATAATGGTGGAGGAGCCTCTCATTTCTCCGGCAGGCGTCACCACGCCTCCCACTCCTGATTCCGTTTCCGATTATTTCTACCCGACCTCCGCCCCAGCCGGTGCCGCGTCAGCAACTTGGTGCGTTCGCCCCATTGTGAGTCCTCCTTCTATTGGGTTAAACTATGGGAACCGTGTTGTTGCTGGGAATGCTTTGAATTTGGGAAGTTGGGTAAGGGCTAGTAATAGTAATAATAATAATACTGGTTTGCATAATGTTTGTAATGATGGTGTACCTGTGAATGTAAGTGGTTTTTCTTATGGTGCTCATGGTGGAACTAGAGTGGCTGATGATACCGGGGATGATTCGAATTCTGGGAGGAAAGTTAAATTTCTGTGTAGTTTTGGTGGGAAGATATTGCCTAGGCCTAGTGACGGAATGTTAAGATATGTTGGAGGACAGACAAGGATAATTAGTGTTAAGAAAGATGTGAGTTATAATGATTTGGTGCTAAAGATGGTAGATACTTATGGACAACCTGTGGTTATTAAGTATCAGTTACCCGAGGAGGATCTTGATGCGTTAGTTTCAGTTGCTTGTCCGGATGATGTTGAGAATATGATGGAGGAGTATGGAAAATTGGTTGAGAGATCTCCGGATGGTTCTGCTAAATTGAGGGTATTTTTGTTCCCTCTCTCAGAGGTTGATCTTTCTGGTGCAGCACAGTCCGGGGATTTGCAGGATACGGGACAGAAATATTTTGATGCGGTGAATGGTTTTATAGATGGGTATGGGGTTTGTTGTGGGTTCAAGAGGAAGGAGAGTATTACAAGTGCAGCTTCTACACAGAATTCTGATTTGAGTGGGATAGAGAATATTGATAGCCCAGTTGCCGGTCAAGGAGATTCGGCGTCCTGCGTGTTATCGCCTAGAGAGTACGTGGCTGCTTCTCCGGATACAAGTGTGAATTTGGCGGCTTCTGAGTCCAACACACCAGTTTACCCGGGTGCTTCTTCTAGTGTTCCATTTGGCATGCCTGCCGCTAAGACTGGTCCAACATGCACTTCGTATACTCAGAATGAGATTGAGTTAGAAAAGTCAGCACCGGTTACATACTCTCAACAACCATTTGAACTGCACCAATCTGGAATGGAAATTCCACCACCTTCACCTTATTTGAACCATGCAGAGTATGTCCACTTGCCTCCTCAGACGGGGTTCCCAAATTCTCAGCTATTAGGAAAGACTGGGCCTGTTTTTGCCCAACACCAGTTTCATAATAATACTACGCCTGGTTTAGCTTTCCGTCAGGTCATCCCCGGAGCACAAATGACAATGACTCAACCTTCTTCTCGCGTTGGTATAAGACCAAATGTCATCCAACCACAACCATTGGTACAACCTCAACATAATCATTTGAACCAATACAGTGATGAAAATACATCAGGAATAAGGATTGTCCAGCTTCCTGCAGAACACAGCTACAATACATATCAGGTCCCGGTTAATCAAGTTCCATCTGTCATAGTTGGAGGTAATCGCGGTTGGGTTCAGGTTCCTCCACAAGAGCATGTTGTTTTCTCTGATGGGACATTACCTCAACAAGTAATAACGCCAGAGAAAATCAACAGAGTTGAGGAATGTTCTATGTGTCAGAAAAAGTTGCCTCATGCTCATTCAGATCCAGTGGTTCCGGATCAGCACGATGGCGGTTCAGGCCCAGTTCCTGATTCAAGCCCAAGTTATAATAGTTTTCCAATGGATGACAATGTAAAAGCTCAAGCAACAAAGAGGGTTGCACCTATGGTGGCATCACCCTTGAAGGAAGGTGTTGTTGAACAAGGGTTTAGCACAAGACCAAGTGACATTAGCAAATTAGAAGTTCATAATGGAGTAAGAAATTGTACTGATAATACTGGGATTTCTTATAATTTTGAACCTCAGCATGAAGGTGGGAGGAATTTTATTCAAAAGCCAGAAGAATTTGACCATTCCATGAATTCATTTATCCAGGAAACAATTGGTAGGACAGATAGAAAACATTCTTCTAGGGATGGGCTTGGGACCATGGGAACGACACCACCTTCTTATCCAGATGATGTTGTCCGCCAGCATATGGCGCCGGTTGAAGCCTGGGTTAAACAAGACGAACACGCGAATAGACATGTTAGTAATGATATACCTATAGTTGATGAAATGACTTTACATACTCCGGAGTGTGTTGCCCAAGGATCTTCCAAAGAGTACACAAATGAGCTTACTGGTGTCGTTTCTAAATCAGATGCAGTAAATAATTGGATTAGGCAGGGCTATGTAAGACCTGTTGATGGAAGGAATGACATTCTCAAGATACACAATGCTGATGGTTATGTAAGTAATGATCGATGTTTACTTCCAGTTGATAAATCTTTAGATTACAAAAGTCAGATTGCTACAGAGGAAGAGGTGATTCTGGACAACAACTTTGTCACACCAAAATTGATAGTTGATGCGGATAAAATTAAGATGGTAGGTGTGCAGCCATCTTCTTCTAAGGAGATTTTATACAGGCACAATTCCAGGACAGGGGAAGACAATGATATTGCACAACCACCTGTGTCGGGTGCTACTCAATCAAATATTGTACACCATCACAAGAATGATTCAACATCATCTACATCATCACCATCTTTCATGTTTTGTGATATGCAGGATTCTCCAAACTCAGTTTTCGGCAATCAGGATCCTTGGAGTATACCACACGGAACCTACAAGAAATCTAATTTGGATGCACAATTGGATGGTGACCTCTTTGAGTCATTCAAACAGAATTTAACTTTTGAAAATGGTTGGTGTGGCAAAGTTTCAACCGAAGACCAACAACTTAAAGTTGTTGCTGAAGATGTAGCAGCTTCTGTTCTGCACCCATGTGCTCCTTCAAATCCTAACTTGCAAGCCGGAGATGTTTCCTGTCGCAAAAACATTGAGGACGGTGATGTTCAAAATAATGCAATAGATGCAATGTGTAGAGATATAACTCAGGATGTCAAGAGCAACCCTCCTGAGAAGGGAAATTTTGGCTTTCCGACATCGGGTGTTGGGCGTTTGCAGATTATAAAGAACTGTGACCTTGAAGAGCTGACAGAGTTGGGTTCTGGTACCTTTGGGACTGTTTATCATGGAAAATGGAGGGGAACCGATGTTGCAATCAAGAGAATAACTGATCGATGTTTTGCTGGAAAGCCTTCAGAGCAAGAGCGCATGAGAGACGACTTCTGGAATGAGGCAATCAAGCTTGCTGATTTGCACCATCCAAATGTAGTTGCTTTCTATGGTGTGGTGCTTGATGGACCAGGAGATTCGGTGGCTACAGTAACTGAGTATATGGCTAATGGTTCTCTCAGAACTGCCTTGCAAAAGAATGAGAGGAATCTAGACAAGCGCAGGCGTCTTTTGATTGCAATGGATGTGGCCTTTGGAATGGAATACCTGCATGGAAAAAACATAGTACACTTTGACTTGAAAAGTGACAACTTGCTAGTGAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTATCCAAAGTAAAATGTCAGACTCTGATCTCTGGAGGTGTGAGAGGAACTCTACCATGGATGGCTCCAGAACTGCTGAATGGAAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTGTTCTCATTTGGTATTGCGATGTGGGAACTCTTAACAGGAGAAGAGCCATACGCTGATTTGCACTATGGTGCTATTATAGGTGGTATTGTGAGCAACACTTTGCGCCCTCCAATTCCCGAATCTTGTGACGTGGAATGGAGTGTGTTGATGGAGAGATGTTGGTCCTCAGAGCCATCAGAGAGGCCCACCTTCACTGACATAGCTGATGAATTACGTTCTATGGCAAGCAAACGCCAGAATCAACAGCTACAACCCTCTCCTTTGTCCACACAAGTCAACAAATGA 4008 0.4356 MAFDQNSAPTELRVLNVAPIMVEEPLISPAGVTTPPTPDSVSDYFYPTSAPAGAASATWCVRPIVSPPSIGLNYGNRVVAGNALNLGSWVRASNSNNNNTGLHNVCNDGVPVNVSGFSYGAHGGTRVADDTGDDSNSGRKVKFLCSFGGKILPRPSDGMLRYVGGQTRIISVKKDVSYNDLVLKMVDTYGQPVVIKYQLPEEDLDALVSVACPDDVENMMEEYGKLVERSPDGSAKLRVFLFPLSEVDLSGAAQSGDLQDTGQKYFDAVNGFIDGYGVCCGFKRKESITSAASTQNSDLSGIENIDSPVAGQGDSASCVLSPREYVAASPDTSVNLAASESNTPVYPGASSSVPFGMPAAKTGPTCTSYTQNEIELEKSAPVTYSQQPFELHQSGMEIPPPSPYLNHAEYVHLPPQTGFPNSQLLGKTGPVFAQHQFHNNTTPGLAFRQVIPGAQMTMTQPSSRVGIRPNVIQPQPLVQPQHNHLNQYSDENTSGIRIVQLPAEHSYNTYQVPVNQVPSVIVGGNRGWVQVPPQEHVVFSDGTLPQQVITPEKINRVEECSMCQKKLPHAHSDPVVPDQHDGGSGPVPDSSPSYNSFPMDDNVKAQATKRVAPMVASPLKEGVVEQGFSTRPSDISKLEVHNGVRNCTDNTGISYNFEPQHEGGRNFIQKPEEFDHSMNSFIQETIGRTDRKHSSRDGLGTMGTTPPSYPDDVVRQHMAPVEAWVKQDEHANRHVSNDIPIVDEMTLHTPECVAQGSSKEYTNELTGVVSKSDAVNNWIRQGYVRPVDGRNDILKIHNADGYVSNDRCLLPVDKSLDYKSQIATEEEVILDNNFVTPKLIVDADKIKMVGVQPSSSKEILYRHNSRTGEDNDIAQPPVSGATQSNIVHHHKNDSTSSTSSPSFMFCDMQDSPNSVFGNQDPWSIPHGTYKKSNLDAQLDGDLFESFKQNLTFENGWCGKVSTEDQQLKVVAEDVAASVLHPCAPSNPNLQAGDVSCRKNIEDGDVQNNAIDAMCRDITQDVKSNPPEKGNFGFPTSGVGRLQIIKNCDLEELTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRDDFWNEAIKLADLHHPNVVAFYGVVLDGPGDSVATVTEYMANGSLRTALQKNERNLDKRRRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIAMWELLTGEEPYADLHYGAIIGGIVSNTLRPPIPESCDVEWSVLMERCWSSEPSERPTFTDIADELRSMASKRQNQQLQPSPLSTQVNK* 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0768 1335 MobiDBLite consensus disorder prediction 568 589 - -
Psa4g0768 1335 SMART serkin_6 1049 1315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0768 1335 SUPERFAMILY CAD & PB1 domains 156 247 - -
Psa4g0768 1335 ProSiteProfiles Protein kinase domain profile. 1049 1316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0768 1335 Gene3D Phosphorylase Kinase; domain 1 1043 1135 - -
Psa4g0768 1335 SMART PB1_new 155 244 IPR000270 GO:0005515
Psa4g0768 1335 ProSitePatterns Protein kinases ATP-binding region signature. 1055 1086 IPR017441 GO:0005524
Psa4g0768 1335 Gene3D - 161 243 - -
Psa4g0768 1335 PANTHER SERINE-THREONINE PROTEIN KINASE 930 1319 - -
Psa4g0768 1335 PANTHER SERINE-THREONINE PROTEIN KINASE 105 893 - -
Psa4g0768 1335 CDD STKc_MAP3K-like 1055 1312 - -
Psa4g0768 1335 SUPERFAMILY Protein kinase-like (PK-like) 1042 1310 IPR011009 -
Psa4g0768 1335 Pfam PB1 domain 160 243 IPR000270 GO:0005515
Psa4g0768 1335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1174 1186 IPR008271 GO:0004672|GO:0006468
Psa4g0768 1335 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 105 893 - -
Psa4g0768 1335 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 930 1319 - -
Psa4g0768 1335 MobiDBLite consensus disorder prediction 1316 1335 - -
Psa4g0768 1335 Pfam Protein tyrosine and serine/threonine kinase 1052 1312 IPR001245 GO:0004672|GO:0006468
Psa4g0768 1335 PRINTS Tyrosine kinase catalytic domain signature 1131 1144 IPR001245 GO:0004672|GO:0006468
Psa4g0768 1335 PRINTS Tyrosine kinase catalytic domain signature 1168 1186 IPR001245 GO:0004672|GO:0006468
Psa4g0768 1335 PRINTS Tyrosine kinase catalytic domain signature 1239 1261 IPR001245 GO:0004672|GO:0006468
Psa4g0768 1335 PRINTS Tyrosine kinase catalytic domain signature 1283 1305 IPR001245 GO:0004672|GO:0006468
Psa4g0768 1335 CDD PB1_UP2 144 242 - -
Psa4g0768 1335 Gene3D Transferase(Phosphotransferase) domain 1 1136 1334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0768 Psa-Chr4 47826603 47833085 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0768 134 1318 MAP Kinase Kinase Kinase AT3G46920 42.624 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Psa4g0768 PK_Tyr_Ser-Thr 1.7e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0768 - - mtr:MTR_4g116520 2175.21