Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0763 ATGATACCCTACGACCCGATAGAATGCATTTTGCAGAGGAAGAAGGAATATGAGGAAGTTATCCGTATGCATAATGAGGTAAAAATTTGGGACGAATCAATCATGATGATAAAATGGACACCGCCGAAGAGCAATATGGTTAAGCTAAATGTTGATGGTGCGTGCAAGGATGAAACTGCTTCTGGTTGTGGTGGTTTGAAACTCACAGCTGAAAAAGGTTTGCAACATGTGGCGATAAATGTGGATTCGATAGAAGCGGGTTTCTCAACTCTCATCAAACTCGAGCAAGAGGGTTTTCGACGAGTGCGGCTAAACACTCTCTTCTCCTCTGCAAAATCCCCAAACTCCACCATGGCTGAACAAACTGAGAAGGCTTATCTGAAGCAACCTAAAGTGTTTCTATGCTCGAAGAAATCTGGGAAGGGAAAGAGGCCTGGTAAAGGTGGAAATCGATTTTGGAAATCTGTTGGTCTTGGCTTTAAGACTCCCAAAGAAGCCACTGAAGGAACCTATATTGACAAGAAGTGCCCCTTCACGCGCAATGTTTCCATCCGGGGTCGTATTATAGCTGGAACTTGCCACAGTGCTAAGATGAATAGGACTATTATTGTTAGGAGGATTATCTTCACTTTATTAAGAAGTATCAAAGATATGAGAAGAGACATTCAAACATCCCGCTCATGTTTCACCTTGTTTCGTGTTAAGGAGGAGATCATTTACTATTGGCCATGCAGGCCACTCTCCAAGACAGTGAGATTCAACGTCTTGAAAGTGATTCCAGCTGGATCATCAGTGGTGCAAAGAGGCATTTGGTGGAATATGACATGTGTTTAA 834 0.4281 MIPYDPIECILQRKKEYEEVIRMHNEVKIWDESIMMIKWTPPKSNMVKLNVDGACKDETASGCGGLKLTAEKGLQHVAINVDSIEAGFSTLIKLEQEGFRRVRLNTLFSSAKSPNSTMAEQTEKAYLKQPKVFLCSKKSGKGKRPGKGGNRFWKSVGLGFKTPKEATEGTYIDKKCPFTRNVSIRGRIIAGTCHSAKMNRTIIVRRIIFTLLRSIKDMRRDIQTSRSCFTLFRVKEEIIYYWPCRPLSKTVRFNVLKVIPAGSSVVQRGIWWNMTCV* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0763 277 Pfam Ribosomal_S17 N-terminal 121 189 IPR032440 -
Psa4g0763 277 Gene3D - 107 269 - -
Psa4g0763 277 SUPERFAMILY Nucleic acid-binding proteins 185 262 IPR012340 -
Psa4g0763 277 PANTHER 40S RIBOSOMAL PROTEIN S11-1-RELATED 118 267 - -
Psa4g0763 277 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 118 267 IPR000266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0763 Psa-Chr4 47195796 47200973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0763 118 274 Cytoplasmic Ribosomal Protein Gene Family AT4G30800 66.038 1.83e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0763 K02949 - jre:108982129 199.519