Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0762 ATGTGTGTGCAAGAGGATGAACAAGTTGATCAAGATAATGATAATATGGACAAAATTCTTGATAACAGAAGAATTTCATGGCCTTTGCATTGTGATCTATTGCATGCCCAGATGGATAATTCAGAAAAAGACTCTTCTTTTGGAGTTTCCAATGGCCAGATCAGTGTTGCAAATTCATTTCCTTTGGAAAGCATTTGTGAAGATGCGGAGATTACAGAGAAAAAACAGAACCTGATAAATTTTGTTCCAACTCTTCGGTCCGGAGAGTGGTCTGATATCGGAGGTCGGCCTTACATGGAGGATACTCACATATGCATTGGAGACTTGGCAAAGAAATTCGGTTACAATGCTGTCTGCGACGAAGCTGTTTCGTTTTATGGTGTATTTGATGGACATGGAGGGAAGAGTGCTGCGCAATTTGTTCGCGATCATCTGCCGAGGGTGATTGTTGAGGATGCTGACTTCCCTCTTGAACTCGAGAAGGTGGTCACGAGATCGTTTTTGGAGACTGATTCGGAGTTTGCAAAAACATGCTCTGCTGAATCTTCCCTTTCTTCTGGTACAACTGCATTGACTGCTATTATATTTGGAAGGTCTTTACTCGTGGCTAATGCCGGAGACTGCCGCGCTGTTTTGTCCCGAGCCGGAGGGGCTATAGAAATGTCCAAAGATCACAGGCCGTTATGCATGAAAGAAAGGATGAGGATTGAGTCGCTCGGCGGATTTGTCGACGATGGTTACTTGAATGGACAGTTAGGCGTGACGCGTGCTCTAGGCAACTGGCATCTTGAAGGAATGAAGGAAATGAGTGGAAGGGGTGGACCATTGAGTGCTGAGCCAGAACTTAAACTGACGACATTGACGAAAGATGACGAGTTTTTGATAATTGGAAGCGACGGAATATGGGATGTTTTTCGTAGCCAAAATGCGGTCGATTTTGCTAGGAGGAGGCTTCAACAGCATAATGATGTTAAACAATGTTGCAAGGAAATAATAGGTGAAGCAATAAAGAGAGGAGCAACAGATAATTTAACTGTTGTGATGGTGTGTTTTCAATCAGATCCACCACCACCTATGATTATTGAAAGGCCTAATAGAGTTAGGAGAAGTATATCTGCTGAAGGACTTCAGAATCTTAAATGCCTGCTTGAAGGATAG 1158 0.4326 MCVQEDEQVDQDNDNMDKILDNRRISWPLHCDLLHAQMDNSEKDSSFGVSNGQISVANSFPLESICEDAEITEKKQNLINFVPTLRSGEWSDIGGRPYMEDTHICIGDLAKKFGYNAVCDEAVSFYGVFDGHGGKSAAQFVRDHLPRVIVEDADFPLELEKVVTRSFLETDSEFAKTCSAESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRAGGAIEMSKDHRPLCMKERMRIESLGGFVDDGYLNGQLGVTRALGNWHLEGMKEMSGRGGPLSAEPELKLTTLTKDDEFLIIGSDGIWDVFRSQNAVDFARRRLQQHNDVKQCCKEIIGEAIKRGATDNLTVVMVCFQSDPPPPMIIERPNRVRRSISAEGLQNLKCLLEG* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0762 385 ProSitePatterns PPM-type phosphatase domain signature. 125 133 IPR000222 GO:0043169
Psa4g0762 385 CDD PP2Cc 86 351 IPR001932 -
Psa4g0762 385 SMART PP2C_4 76 349 IPR001932 -
Psa4g0762 385 SUPERFAMILY PP2C-like 76 352 IPR036457 -
Psa4g0762 385 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 369 - -
Psa4g0762 385 ProSiteProfiles PPM-type phosphatase domain profile. 86 351 IPR001932 -
Psa4g0762 385 PANTHER PROTEIN PHOSPHATASE 2C 1 369 IPR015655 GO:0004722|GO:0006470
Psa4g0762 385 Pfam Protein phosphatase 2C 98 343 IPR001932 -
Psa4g0762 385 Gene3D - 67 354 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0762 Psa-Chr4 47139789 47142259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0762 54 385 PP2C-type Phosphatase Gene Family AT2G25620 57.485 3.19e-132 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Psa4g0762 PP2C 3.8e-67 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0762 K14803 - gmx:100782648 650.203