Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0745 ATGTTTCCAACCAATTTTGCTTTCTTCTTTGTCTTCCTCTCTCTGACATCTCACTCTTTTGCTGCAGACACCACCTCTTGGGTGAAAGCTGGTTACTACTATTCCGGCAGTGAAATTTCAGCTTCAGAAATTAAATCAACACTTTTCACACACCTCTTATGTGCTTTTTCTTTTATCAACTCCACAAACTATAACATCTTTATAAACTCTTCTGAAGAACACAAATTCTCCACCTTCACCAACACAGTGAAGCTTCAAAATCCATCTGTTATAACTCTTCTATCAATCTACACTGGAAGAGAAAACTCTTCAGTTTTCAATTCAATGATAAACCAATCTTCTTACAGAAAATCTTTCATTGATTCTTCCATCAAAACAGCAAGAAAATATGAGTTTCAAGGCATAGACCTTTGTGGAGTCTCACCAAAGCAAGGTCAAGAGCTTGCGAATTTCGCAACCCTTTTGAAAGAGTGGCGAATCGCGATAACTTCTGAGGCAAGAAACATTAAAAAGACAGAATTAGTGTTGGTGATGGCAGGTTATTATCTTAAATATTCAGATTCATTTAGTTACCCTTTTGAATCAATGCAGAAGAATTTGGATTGGGTTCATTTTGTTGCATATGATTACTATCTTCCTAAAAAGGATAGTGTCACAGGTTTTCATGCAGCTTTATATGGTTCATCTGGTTGGGAAAACACTGATTCTGGTATCAAAGAGTGGAGAAAGAGAGGATTTTCTTCTAATAAACTTGTAATAGGTTTACCTTATCATGGATTTGCATGGACACTTGTGAAACAAGGTGAAGGTGGTGTTGGAAAACCAGCGTCTGGTCCTGCTATTACTATGGATGGTTCTATGGCTTATAAGTTGATAAAAAGTTACATTAGAAGCTTTGGAGATGGAGTAGTTTCAAGTTATAATGATACTTTTGTGGTGAATTATTTCACTGTTGCTTCCACTACTTGGGTTAACTTTGATGATGTGGAAGCTATTAAAGAAAAAGTTTCTTATGCGAAGAAAAATGGATTACTTGGTTACAATGCTTTCCAAGTTGGGAATGATGAAAACTGGGTCCTTTCAAAGGCAGCTCAAGAAGTAGATGAAGGTCATCATAACAGAAGGTTGCTGATAATTGTTCTGCTTACCGCTTTGACTGCTTCACTTCTCTTGGGAATAGTATTTTGCTACTACTACCAAGCAGGAACAATGGCGATTCTTACAAGAATGATATTCAAACTGAGGATATGTTTTTCAGAAGCTGAAGAAGATCTCAATGGAAATGCTTCTGATTTGATAGTATTTGGCTATCTCACAATTAAAGTAGCAACCGATAACTTCTCAAAAGAAAATAAGCTTGGAGAAGGTGGATTCGGTGCAGTGTACAAGGGAAAATTACGAAAGGGACAGGAAATAGCTGTCAAAAGACTCTCAGAAAACTCGAATCAAGGACTTGAAGAGTTCAAAAACGAGATCACACTCACAGCAAGATTACAACATGTGAATTTAGTTAGACTTTTAGGCTACTGCACAAAAAGGAATGAGAAGCTTCTCATCTATGAATATCTCCCAAATAAAAGCTTAGATCATTTTCTGTTTGATCCAAGGAAATCAATTCTTCTAGATTGGAGGAAGCGTGTGAATATCATTGAAGGGATTACTCAAGGCCTTCTTTATCTCCAAGAATACTCAAATTTTACTATAATCCACCGAGATCTTAAAGCTAGTAATGTTTTGTTAGACCATGAGATGAATCCTAAGATATCAGATTTTGGTATGGCTAGAATTTTCGAGAAGTATGAACCTGAAGCAAATACAAGCAGAATCGTCGGAACATACGGGTATGTACCTCCCGAGTATGTCAGAAAAGGCATATACTCACCCAAATACGATGTTTATAGTTTTGGAGTTCTTCTCTTGCAAATCATAAGTGGAAAGAGGACTTCACAATATTACGGCCCAGATGAAAATATGAATCTTTTGGAATATGCATATGAGCTATGGATGGAAGGAAGAGGTGATGAGTTTTTGGACCCTTCATTGGATGATTCAACATGTCATTGTAAAATCATGAGATGCATGCAGGTTGGTCTTTTGTGTGTTCAAGAGAACTCAGCAGATAGACCTTCCATGCTAGAAGTTGATTCACTGCTCAAGAATGAAGGTACACCTGTTGGTACTCCTAACATGCCCGCTTTTTCGATGAAAAAATACGAAGATGATAAGGGAGATACTTCTAACTCAAGGTTGAAATTTTCTTCAATCAATGATGTTACAATTTCTCAAATGGTACCAAGATAA 2301 0.3681 MFPTNFAFFFVFLSLTSHSFAADTTSWVKAGYYYSGSEISASEIKSTLFTHLLCAFSFINSTNYNIFINSSEEHKFSTFTNTVKLQNPSVITLLSIYTGRENSSVFNSMINQSSYRKSFIDSSIKTARKYEFQGIDLCGVSPKQGQELANFATLLKEWRIAITSEARNIKKTELVLVMAGYYLKYSDSFSYPFESMQKNLDWVHFVAYDYYLPKKDSVTGFHAALYGSSGWENTDSGIKEWRKRGFSSNKLVIGLPYHGFAWTLVKQGEGGVGKPASGPAITMDGSMAYKLIKSYIRSFGDGVVSSYNDTFVVNYFTVASTTWVNFDDVEAIKEKVSYAKKNGLLGYNAFQVGNDENWVLSKAAQEVDEGHHNRRLLIIVLLTALTASLLLGIVFCYYYQAGTMAILTRMIFKLRICFSEAEEDLNGNASDLIVFGYLTIKVATDNFSKENKLGEGGFGAVYKGKLRKGQEIAVKRLSENSNQGLEEFKNEITLTARLQHVNLVRLLGYCTKRNEKLLIYEYLPNKSLDHFLFDPRKSILLDWRKRVNIIEGITQGLLYLQEYSNFTIIHRDLKASNVLLDHEMNPKISDFGMARIFEKYEPEANTSRIVGTYGYVPPEYVRKGIYSPKYDVYSFGVLLLQIISGKRTSQYYGPDENMNLLEYAYELWMEGRGDEFLDPSLDDSTCHCKIMRCMQVGLLCVQENSADRPSMLEVDSLLKNEGTPVGTPNMPAFSMKKYEDDKGDTSNSRLKFSSINDVTISQMVPR* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0745 766 ProSiteProfiles Protein kinase domain profile. 447 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0745 766 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 762 - -
Psa4g0745 766 Pfam Protein kinase domain 447 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0745 766 Gene3D Glycosidases 42 356 - -
Psa4g0745 766 CDD STKc_IRAK 453 720 - -
Psa4g0745 766 SUPERFAMILY (Trans)glycosidases 28 368 IPR017853 -
Psa4g0745 766 SMART serkin_6 447 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0745 766 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 18 762 - -
Psa4g0745 766 Gene3D Transferase(Phosphotransferase) domain 1 523 724 - -
Psa4g0745 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 568 580 IPR008271 GO:0004672|GO:0006468
Psa4g0745 766 SUPERFAMILY Protein kinase-like (PK-like) 431 734 IPR011009 -
Psa4g0745 766 Gene3D Phosphorylase Kinase; domain 1 421 522 - -
Psa4g0745 766 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 27 371 IPR001223 GO:0005975
Psa4g0745 766 Pfam Glycosyl hydrolases family 18 32 355 IPR001223 GO:0005975
Psa4g0745 766 SMART 2g34 27 355 IPR011583 GO:0008061
Psa4g0745 766 Gene3D - 257 326 IPR029070 -
Psa4g0745 766 CDD GH18_plant_chitinase_class_V 25 361 - -
Psa4g0745 766 ProSitePatterns Protein kinases ATP-binding region signature. 453 475 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0745 Psa-Chr4 45997930 46001069 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0745 420 766 Receptor kinase-like Gene Family AT4G11480 48.315 4.46e-114 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa4g0745 Glyco_hydro_18 2.9e-50 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0745 - - aprc:113847882 1177.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0745 4 45997930 46001069 Psa4g0745 4 45997930 46001069 ECH
Psa4g0745 4 45997930 46001069 Psa1g3932 1 323330278 323333716 PCT