Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0737 ATGGCGGCAACGTCAGAAGCTATGAATCAATTCGATGAATCGATGAAGAAACAAATAGCAGTAATTTTGAAGGTTGTGCTTCTGAATAAATCGCTAAAAGAGGATAATATTCCATGCGAAATTGACGAGGGTCTCTTTTTGGGTTCGATTGGTTCTGCGGGGAACAAGGTTGGTTTGAAGAATGTTAATGTTACACATATTTTGACTGTGGCTGGGAAAATTGCACCTGCACATCCTGGAGATTTTGTCTATAAGGTTATAGATGTTGCTGACAAAGAGGATACCAACTTAACACAATACTTCAACGACTGTTTTGAATTTATTGACGAAGCCAAAAAAAACGGTGGATATGTTCTGGTTCACTGTTATGCTGGAAGATCAAGGAGTGTGACCATCATTGTGGCATATCTGATGAAGTATCGTGGAATGAGCTTATCTGAAGCTCTACAACATGTAAAGAACAAAAGACCAAAAGCAGCTCCTAACCGTGGTTTCATTCGTCAGCTGGAAGACTTTGAGAAATCTCTTCAAGGTGAAAACTGCATTAATATTGAATACCATTAA 564 0.3865 MAATSEAMNQFDESMKKQIAVILKVVLLNKSLKEDNIPCEIDEGLFLGSIGSAGNKVGLKNVNVTHILTVAGKIAPAHPGDFVYKVIDVADKEDTNLTQYFNDCFEFIDEAKKNGGYVLVHCYAGRSRSVTIIVAYLMKYRGMSLSEALQHVKNKRPKAAPNRGFIRQLEDFEKSLQGENCINIEYH* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0737 187 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 99 157 IPR000387 GO:0016311|GO:0016791
Psa4g0737 187 ProSiteProfiles Dual specificity protein phosphatase domain profile. 37 178 IPR020422 GO:0006470|GO:0008138
Psa4g0737 187 CDD DSP 38 171 - -
Psa4g0737 187 SMART dsp_5 37 175 IPR020422 GO:0006470|GO:0008138
Psa4g0737 187 Gene3D Protein tyrosine phosphatase superfamily 30 185 IPR029021 -
Psa4g0737 187 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 35 179 IPR029021 -
Psa4g0737 187 Pfam Dual specificity phosphatase, catalytic domain 45 174 IPR000340 GO:0008138|GO:0016311
Psa4g0737 187 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 4 181 - -
Psa4g0737 187 PANTHER BNAA01G23680D PROTEIN 4 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0737 Psa-Chr4 45539778 45542736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0737 40 178 Protein tyrosine phosphatase (PTP) family AT3G06110 58.273 3.78e-58 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0737 - - aprc:113847529 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0737 4 45539778 45542736 Psa4g0737 4 45539778 45542736 ECH