Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0734 ATGGGTGGTTCATGGAGTAACAATAATAACAGAAACAGAAGAAGAAACAGTTACCATGAACACTACCCACCTCCTCCTCCAACCTACTATTATCAATACTCTTCTCAACCTCACCCTATGATGCCACAGCCTCAGCCTCCTCAAGGTTACTTTCCTCCTCATTCTCATCACTTCTACTCAAATCTCCCTCACCACCCTTCCTATGCAGCAGCAGCCGCAACAACGACGACAAATACTCAACCGTTCGGAGTAGATTTGAATGTGAATGTTGTTGCTCAACCACCTCCACCACCGCCGTATGTTGACCATGAAACTGCAAAGAAGGTAAAGAATGATGTCAATTTGCATAAACATACTCTACAGCTCCACCTGGATCCCAACAATTCCGATCACCACTTGATTTCCTTCGTTTTCGACGCCCTCTACGATGGCAGAATTACAATCTTTTACTTAGCGAAAGAAGAAGAACATAAATGTAGGTTTTTTCCTCTATTTCCTGAAGCGTTTGAGCCGATAACGTTCCCCTTTCAGAAAGGAGTTGGTCAGAAATTCTGCCAGCCTTCAGGAACAGGCATTGATTTAGGTTTCTTTGAGTTGGATGATCTTTCAAACCCTTCACCTGAGGAAGATGTGTTTCCTCTTGTAATATGCGCCGAAACAACGCCTTTGGCAGATCACGAAACTCCCTCTAGTTCCTTTGTAGATGCATCCCCTCATATGCAAATAACTCAAGCTGTTTTGGAGAAAACCAATGGAACTGGTCCTTTTCAGGTTAAAGTAGTTAGGCAGATTCTATGGATCGATCAAGTTCGTTATGAACTGCGAGAGTTATATGGAATTGGTAACTCAACAGCGCCTGATTTCGATCGTAATGATCCTGGAAAAGAGTGTGTGATATGCATGACTGAACCCAAGGATACTGCTGTCTTACCTTGCAGGCACATGTGTATGTGTAGCGAGTGTGCGAAAGCGCTGCGTGTTCAGTCAAATAATTGCCCTATATGCCGCCAACCTATCGAGCAACTTATAGAGATCAAGATAAACGACGACGATGACGAATGA 1062 0.4369 MGGSWSNNNNRNRRRNSYHEHYPPPPPTYYYQYSSQPHPMMPQPQPPQGYFPPHSHHFYSNLPHHPSYAAAAATTTTNTQPFGVDLNVNVVAQPPPPPPYVDHETAKKVKNDVNLHKHTLQLHLDPNNSDHHLISFVFDALYDGRITIFYLAKEEEHKCRFFPLFPEAFEPITFPFQKGVGQKFCQPSGTGIDLGFFELDDLSNPSPEEDVFPLVICAETTPLADHETPSSSFVDASPHMQITQAVLEKTNGTGPFQVKVVRQILWIDQVRYELRELYGIGNSTAPDFDRNDPGKECVICMTEPKDTAVLPCRHMCMCSECAKALRVQSNNCPICRQPIEQLIEIKINDDDDE* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0734 353 MobiDBLite consensus disorder prediction 1 24 - -
Psa4g0734 353 PANTHER MAHOGUNIN 1 351 IPR045194 GO:0061630
Psa4g0734 353 Pfam Zinc finger, C3HC4 type (RING finger) 295 341 - -
Psa4g0734 353 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 1 351 - -
Psa4g0734 353 SUPERFAMILY RING/U-box 296 342 - -
Psa4g0734 353 ProSiteProfiles Zinc finger RING-type profile. 297 336 IPR001841 -
Psa4g0734 353 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 282 346 IPR013083 -
Psa4g0734 353 SMART ring_2 297 335 IPR001841 -
Psa4g0734 353 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 296 336 IPR045195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0734 Psa-Chr4 44967728 44968993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0734 100 353 C3H Transcription Factor Family AT3G06140 60.784 2.06e-102 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0734 - - gmx:102665712 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0734 4 44967728 44968993 Psa4g0734 4 44967728 44968993 ECH