Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0721 ATGGCTTCCTCCCCCTCAAACACCACCCTTCCTCCTCTTCCCGATCCACCCATCGCCGTACCCCTCGCTCTCCCCGCCCCACTCCCTCTCCCACCTTCCACTCGTCGTCTTCCTCCTCCTTGCTGGTCCCCCGACGAAACCCTCGCCCTCATCGATTCTTATCGCGACAAATGGTACTCTCTTGGCCGTGGAAACCTGAAAGCCACTCATTGGCAAGAAGTGGCTGACGCTGTTTCTCATCGTTGCCCTAACGCTTCTCCGGCGAAAACTCCCGTTCAATGCCGTCATAAGATGGAGAAGCTTCGTAAGCGTTATCGCACTGAGATTCAACGTGCTCGCTCACTCCCTCTCTCTCGATTCAACTCCGCTTGGGTTCACTTTAAACTCATGGATTCCATGGAGAAAGGTCCTTCTCCGGTTAAATCTGAAAACAACGATTCAGATAGCCCCGATGATGACGAAGAAGAAGATCAGGATCAAGATCTCTACATGGATATCAAAAACGGCCACGGATCTAACACTAGAAGCATCAATAAATTATATAGAAACGGTTTCGGTGGCGGTAGCGGTGGTGGAGGTGGTGTTGGCGTCGGCGGAGGGTTCAGGATTAGGTTTCCACCGGCACAACCTGAATCAAGATTTCCTTCTGATCAGAAGTATAACCCTAATCTGCATCACAACTACGGGACGCCGCCGCCTCCTCCGGCTGCCGCAACGAAGGGAATGGGTAACAAGAGGGAAAGAGATCCATTGGGAGAGGTTGTGTCCGCGATCAAGGTATTGGGAGACGGGTTTGTGAGGATGGAGCAAATGAAGATGGAGATGGCAAGGGACATTGAAGCTATGCGGATGGATATGGAAATGAAGCGCACCGAGATGATTCTCGAATCTCAGCGTCGAATTGTCGAGGCATTTGCCAAAGCAGTTTCCGACGACAACAACAACGGAAGCAACCACAAGATGAAGCCTGTTAATAAGAGAATCCCCTCACCGCAACAACCATAA 1005 0.5134 MASSPSNTTLPPLPDPPIAVPLALPAPLPLPPSTRRLPPPCWSPDETLALIDSYRDKWYSLGRGNLKATHWQEVADAVSHRCPNASPAKTPVQCRHKMEKLRKRYRTEIQRARSLPLSRFNSAWVHFKLMDSMEKGPSPVKSENNDSDSPDDDEEEDQDQDLYMDIKNGHGSNTRSINKLYRNGFGGGSGGGGGVGVGGGFRIRFPPAQPESRFPSDQKYNPNLHHNYGTPPPPPAAATKGMGNKRERDPLGEVVSAIKVLGDGFVRMEQMKMEMARDIEAMRMDMEMKRTEMILESQRRIVEAFAKAVSDDNNNGSNHKMKPVNKRIPSPQQP* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0721 334 Coils Coil 95 115 - -
Psa4g0721 334 SMART 118neu2 49 138 IPR006578 -
Psa4g0721 334 ProSiteProfiles Myb-like domain profile. 42 102 IPR001005 -
Psa4g0721 334 PANTHER TRANSCRIPTION FACTOR 1 317 - -
Psa4g0721 334 MobiDBLite consensus disorder prediction 135 158 - -
Psa4g0721 334 Gene3D - 42 107 - -
Psa4g0721 334 MobiDBLite consensus disorder prediction 227 250 - -
Psa4g0721 334 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 317 IPR044823 -
Psa4g0721 334 MobiDBLite consensus disorder prediction 308 334 - -
Psa4g0721 334 Pfam Myb/SANT-like DNA-binding domain 40 133 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0721 Psa-Chr4 44562132 44563136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0721 41 133 Trihelix Transcription Factor Family AT3G14180 36.559 3.34e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Psa4g0721 Myb_DNA-bind_4 1.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0721 - - vun:114179736 382.489