Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0702 ATGGGGTGTGTGTTTGGGAAAGAGGCTTCATGGAGGAGGAAAGAGGAAGTGGAAATTGCTAAGGTAGAGGAGGCTAAGTGTGAGGTTCAAATTCAAAATGGTGAGAGTGAGAAAGAGGGTGGAGGGGAGGAGGAGGAGGAGGAGGAGGAGAAGAGGAGGAGACAAAGGGAAAGGAGGGAGAGGAGGCGATCTTTGAAGCCGAATCCGAGATCGAGCAATCCACCTAACTATATACATGGTGAGCAAGTGGCTGCAGGGTGGCCTTCTTGGCTCTCCAAGGTTGCTGGAGAAGCCATACATGGATTGATGCCTCGAAGGGCCGACAGTTTTCACAAGATTGATAAGATTGGACAAGGTACATATAGCAATGTTTACAAAGCTAAGGATACTTTAACTGGGAAAATTGTTGCACTAAAGAAGGTCCGTTTCGACAATTTAGAGCCAGAGAGTGTGAAATTCATGGCCAGAGAAATTCTGATTCTGCGTCGTCTGGATCATCCCAATGTTGTCAAACTAGAAGGTTTGGTGACTTCTAGGATGTCATGTAGTTTGTATCTTGTCTTCCAATACATGGAGCATGATTTGGCTGGACTTTCTACGAGCCCGGATATTAAGTTTACGGTGTCTCAGATTAAATGCTACATGCATCAGCTATTGTCTGGACTGGAACACTGTCACAACCGTAATGTACTGCATCGTGATATAAAGGGATCGAACCTTCTCGTTGATAATGAAGGAGTTCTTAGGATTGCTGATTTTGGATTAGCTTCCTTCTTTGATCCTAATCACAAGCAACCTATGACTAGTAGGGTGGTTACTTTATGGTATCGATCTCCCGAGCTTCTTCTAGGAGCCACCGATTATGATGTAGGCGTGGACCTGTGGAGTGCTGGCTGTATCCTTGCTGAATTGTTGGCTGGAAGGCCTATTATGCCTGGTCGAACCGAGGTGGAACAGCTGCATAAGATATTTAAGCTATGTGGTTCTCCTTCTGAAGAATATTGGAGAAGGGCAAAGCTACCACATGCTACCATTTTTAAGCCTCGACAATCATATAAGCGGTGCATAGTAGAGAAATTCGAAGATTTCCCGCTATCATCATTGCCACTAATTGAAACCCTTCTAGCAATCGATCCAGCTGAACGTCAAACTGCCACTGCTGCATTGCACAGCGAATTCTTTACAACACAGCCTTATGCTTGTGAACCCTCTAACCTTCCAAAATATCCTCCCAGTAAGGAGATGGACACAAAGCTAAGGGATGAGGAAGCTAGAAGATTAAGGGCCACTGGCAAAGGTAATGCTATTGGCAGTAAGAAGTTGCGTTCGCGTGATCGAAGTGGGAGGGGAATCGCAGTTCCAGAGGTCAATGCTGAGCTGCAAGAAAATATTGATAGATGGAGACTGATAACGCGCGCAAATGCAAAAAGCAAGAGTGACAAGTTTCCTCCGCCTCATCAAGATGGAACTTTAGGCTATCCTATGAGTTCTTCTTATCACATTGAACCAGTTTTTGATCCTCCTGATGTTCCATTCAGTTCCACAGACTTCTCATATCATAAAGCAAGTATTCAGACCTGGTCGGGCCCATTGATGGAACCGAGGATGAGTGTGCCGAGGAGAAAAAAGAACAAGGCAGGTGACCAGCACATGAGATCGAAGTCATCAAAAAGAAACATAAATAGATAG 1689 0.4494 MGCVFGKEASWRRKEEVEIAKVEEAKCEVQIQNGESEKEGGGEEEEEEEEKRRRQRERRERRRSLKPNPRSSNPPNYIHGEQVAAGWPSWLSKVAGEAIHGLMPRRADSFHKIDKIGQGTYSNVYKAKDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFQYMEHDLAGLSTSPDIKFTVSQIKCYMHQLLSGLEHCHNRNVLHRDIKGSNLLVDNEGVLRIADFGLASFFDPNHKQPMTSRVVTLWYRSPELLLGATDYDVGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIFKLCGSPSEEYWRRAKLPHATIFKPRQSYKRCIVEKFEDFPLSSLPLIETLLAIDPAERQTATAALHSEFFTTQPYACEPSNLPKYPPSKEMDTKLRDEEARRLRATGKGNAIGSKKLRSRDRSGRGIAVPEVNAELQENIDRWRLITRANAKSKSDKFPPPHQDGTLGYPMSSSYHIEPVFDPPDVPFSSTDFSYHKASIQTWSGPLMEPRMSVPRRKKNKAGDQHMRSKSSKRNINR* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0702 562 SUPERFAMILY Protein kinase-like (PK-like) 104 399 IPR011009 -
Psa4g0702 562 Gene3D Phosphorylase Kinase; domain 1 98 192 - -
Psa4g0702 562 ProSiteProfiles Protein kinase domain profile. 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0702 562 Gene3D Transferase(Phosphotransferase) domain 1 193 432 - -
Psa4g0702 562 PANTHER OS01G0367700 PROTEIN 46 546 - -
Psa4g0702 562 PANTHER CELL DIVISION PROTEIN KINASE 46 546 - -
Psa4g0702 562 SMART serkin_6 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0702 562 MobiDBLite consensus disorder prediction 525 562 - -
Psa4g0702 562 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Psa4g0702 562 MobiDBLite consensus disorder prediction 536 555 - -
Psa4g0702 562 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Psa4g0702 562 MobiDBLite consensus disorder prediction 25 77 - -
Psa4g0702 562 CDD STKc_CDK9_like 110 394 - -
Psa4g0702 562 Pfam Protein kinase domain 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0702 Psa-Chr4 43987959 43990522 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0702 105 426 Core Cell Cycle Gene Families AT5G10270 50.592 4.53e-112 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Psa4g0702 Pkinase 1.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0702 K08819 - gmx:100791757 888.641