Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0688 ATGATAAAGAACGACGACGACATTGGTGTTTGCATTGTGTTATTGTGTGTCATTTTCACAAGTCAGAAATTTGGTCTTTTCTTCAAAATCTCTTCTTCACCACTACCAGTTACTCTGCCAAGGGCGGATGTAAATTTGAAGGCTGCACATCTTTTGGGAGACTGGTGGAAGTGGGATATTGGAAGTACACTTGGCTACACCTCGCACTCTACGGTTTTGAGATTTGGATCTTTGATGGACTGCAACAAAGAAGAGGCCATAAGGGCCAAGGACATTGCTGCAAAGAAGATGGAAAACAAGGATTTCGCGGGGGCTCGTAAATTTGCTCTTAAGGCTAAGCAGTTGTATCCAGTTTTGGATAATATAGCTCAAATGCTTGTTGTTTGTGATGTGCACTGCTCTGCAGAGCAGAAAGTGTTCGATAATGAGATGGACTGGTATGGAATTCTTCAGCTAGAACACACAGCTGGTGACGCAATGATTAAGAAGCAGTATCGAAAGTTTGCTCTTCAGCTTCATCCCGATAAAAACAAGTTTTCTGGTGCTGAATCTGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTACTTTCAGACACTGTTAACCGAATTAGGTATGACATGAAGCTTAGGTTGAACAAAGCTTTTATGCCTCGTCAAAATCAACAGAAGGTTCCTCCGAATTTCAATTCTGCAATGAAAAACAATGTCAGCCCCAACTTTACAAACTCAAACACCCAAAAGCAGCAGCAAAATAAGCAGCCTGCACAGCAGCAGCAAAATAAGCAGCCTGCACAGCAGCAGCAAAACGGTGTGCGCCGCACTTTTTGGACTGCCTGCCCATTTTGCACCGTGAGGTATCAGTACTATAGAGAAGTTATAAATAAATCTATTCGCTGTCAACAATGCCATAGGCCCTTCGTTGCATATATTGTGGACGGGCAAGGTTCGTCTCAAACAACTAACTCAAGTCAGCAAGCATTTGGCCAGAAGAAAGATGGTTTGAATCAAGGTACTTGGAAGGAAAGTGTTGGATCTGAAGGCAACTCGCATACTGAGAAGTCCAATACAGGGCCTTTCAAGAATAAAGATCCCGTTGATGTCTCGGGAAAGCCAAATGTAAAGAGAAAGTGGGATCCATTGGAAGGACTCAGTCTAAGCTCTGATTCTTCAAGTAGTGGTGATTCTGATTCTGACTGTGAAATATTTGCTGGTGTGAATGGCTTTCCAGGTGTAAAAAACCATTCAACTGGGCAGCCACACAGATCTGTGCGACAGAAGTTTAATGTTTCCTACAGTGATAATATGAGTGACAATGACTTATTAAGAACTTCAAAAAGGGGTGAGGAGAATGGAGCACCTTGTGTTAATGGTCTTCATAATGATACCGCTAAAACGAATGATCAGAATGGCTCAGCAGCTGATCCAAAAGATGGAGCACCTTGTGTTAATGGTCAAAGTCATAATGAGACCGCCAAAACGAATTATCAGAATGGTTCGGCAGCTGATCCAAAGGATGAACAAGAAAAGGTAAAGCAGAAACAAGATTTTCATTCAAAAGAGAGCTCACTGAATAGAAATGAGGAAAAAACTTGGGCAAATGGAAAAGAAGCCGTGGGTGGATCAAAGCAGATGGGTGAATCTTCAGAGCATTTTTCTCCAAATTCAGTCTATAAGGCAACAAATCATCCTAATGCTAACGTATATCCCAATGCAGAGCATTCTTCTCCAAATTCAATCTATAAGGCAACAAATTATCCTAATGCTTATGTCTATCTCAATGCTGAGTTCAGCAATTTTGACAAGGACAGAAAAAAAGGATGTTTTGCGCCTGGGCAGATTTGGGCTATCTATGATACAACAGATGGCATGCCTAGATTCTACGCTTTAATCAGAGAAGTTCTCTCTCCTGAATTTCATTTGAAGGCAACATGGCTTGAACCACATCCAGATGACAAGGATGAAATCAAGTGGGTAGATAAGGATTTGCCTGTGGCTTGTGGTAAATTTAAACTTGGTACCACTGATTTGATTAAAGATCATCTTATGTTTTCTCATCTAGCTCAGTGTGATAGGATTGGCCGCAATACTTTTAAAGTCTATCCTAGAAAGGGAGAAACATGGGCTGTTTTTAAAAATTGGGATATCAAATGGTACATGAATGCAGAATTTCGTAAGCAGTATAGATATGAGTTTGTTGAAATCTTGTCAGATTATGTCGAAGGTGAGGGTGTATCTGTTGTGTACTTGGGTAAGTTGAAAGGTTTTGTAAGCCTCTTCTTTCACATTATGAAAGAAGACAACCGGCCATTTCAAATTCCATCCCTGGAGTTATTTAGATTTTCTCACAGGATTCCATCTTTCAAAATGACTGGTCAGGAAGGAGCAGGTGTTCAATTAGGATATTTAGAATTTGATCCTGCATCTATACCAATGAATCTTGAAGAGTTTGCTGTTCCTCGAAATTTGGATGCGAAGATTGAGCATAGTTCACGTGGCAGTCAGAATGCAAAATCTTCACAAAGATCAAAACCCTTGACGAGGCCGGAAGAAATTGCATCCACTCCCAAGGTTAATATTGAACCAAGCAATCCGACTGAGATAAAAGATTCTCTTGGTGATATGGATGACGGCCATGCTACTCCAACTTCAACCCTTGATGCTTTTGAAATTCCAGATGCTCAATTCTTCAACTTTGAAACTTGGAGGTCTCTTGATAAGTTCCAGATTGGTCAAATATGGGCATTTTACAGTGATGAAGATGGAATGCCAAAATACTATGGTGAGATTAAAAAAATTGGGACTAGCCCTGATCTTGAGTTACATGTTAATTGGCTTGCTTGCTCCCAGCTACCAGAGGGTACCACTAAATGGAAAGATGAAGATATGCTTACTACCTGTGGCAGGTTTAGAATCATGAAAACAAATGATTTTCTCTCTGTTTACAATAGCCTGTCTTGTATTTCACATCAAGTACAAGCTGAGGCTATCGGGAAGAGCTACGCCATCTATCCGAGAAAAGGTGAAGTATGGGCTCTATATAGGAAATGGTCAAATGAAATCAAGTGTTCTGACCTGAAAAATTTGGAGTATGATATAGTGGAAGTTCTTGAAGAAGGTAATTGGTTTATAGAGACTTTAGCTTTGGAGAATGTTAGTGGTTATCGTAGCGTCTTCAGAGGCAAAGTAAATGAAGGTTCTTCTGTCAAAGTGAGAATAGCCAGAAAATATTTGCTTAGTTTCTCTCACCAAATTCCAGCTTTCAAACTGACACAAGAGCATGGCAATCTCAGCGGCTTCTGGGAGCTTGATCCGGGTGCGCTACCACCTTCGTTCCTTTGGCCTTAG 3345 0.4078 MIKNDDDIGVCIVLLCVIFTSQKFGLFFKISSSPLPVTLPRADVNLKAAHLLGDWWKWDIGSTLGYTSHSTVLRFGSLMDCNKEEAIRAKDIAAKKMENKDFAGARKFALKAKQLYPVLDNIAQMLVVCDVHCSAEQKVFDNEMDWYGILQLEHTAGDAMIKKQYRKFALQLHPDKNKFSGAESAFKLIGEAQRVLSDTVNRIRYDMKLRLNKAFMPRQNQQKVPPNFNSAMKNNVSPNFTNSNTQKQQQNKQPAQQQQNKQPAQQQQNGVRRTFWTACPFCTVRYQYYREVINKSIRCQQCHRPFVAYIVDGQGSSQTTNSSQQAFGQKKDGLNQGTWKESVGSEGNSHTEKSNTGPFKNKDPVDVSGKPNVKRKWDPLEGLSLSSDSSSSGDSDSDCEIFAGVNGFPGVKNHSTGQPHRSVRQKFNVSYSDNMSDNDLLRTSKRGEENGAPCVNGLHNDTAKTNDQNGSAADPKDGAPCVNGQSHNETAKTNYQNGSAADPKDEQEKVKQKQDFHSKESSLNRNEEKTWANGKEAVGGSKQMGESSEHFSPNSVYKATNHPNANVYPNAEHSSPNSIYKATNYPNAYVYLNAEFSNFDKDRKKGCFAPGQIWAIYDTTDGMPRFYALIREVLSPEFHLKATWLEPHPDDKDEIKWVDKDLPVACGKFKLGTTDLIKDHLMFSHLAQCDRIGRNTFKVYPRKGETWAVFKNWDIKWYMNAEFRKQYRYEFVEILSDYVEGEGVSVVYLGKLKGFVSLFFHIMKEDNRPFQIPSLELFRFSHRIPSFKMTGQEGAGVQLGYLEFDPASIPMNLEEFAVPRNLDAKIEHSSRGSQNAKSSQRSKPLTRPEEIASTPKVNIEPSNPTEIKDSLGDMDDGHATPTSTLDAFEIPDAQFFNFETWRSLDKFQIGQIWAFYSDEDGMPKYYGEIKKIGTSPDLELHVNWLACSQLPEGTTKWKDEDMLTTCGRFRIMKTNDFLSVYNSLSCISHQVQAEAIGKSYAIYPRKGEVWALYRKWSNEIKCSDLKNLEYDIVEVLEEGNWFIETLALENVSGYRSVFRGKVNEGSSVKVRIARKYLLSFSHQIPAFKLTQEHGNLSGFWELDPGALPPSFLWP* 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0688 1114 MobiDBLite consensus disorder prediction 340 397 - -
Psa4g0688 1114 SUPERFAMILY Chaperone J-domain 140 209 IPR036869 -
Psa4g0688 1114 MobiDBLite consensus disorder prediction 412 476 - -
Psa4g0688 1114 MobiDBLite consensus disorder prediction 383 397 - -
Psa4g0688 1114 MobiDBLite consensus disorder prediction 243 270 - -
Psa4g0688 1114 MobiDBLite consensus disorder prediction 828 847 - -
Psa4g0688 1114 Pfam DnaJ domain 145 206 IPR001623 -
Psa4g0688 1114 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 65 476 - -
Psa4g0688 1114 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 571 1112 - -
Psa4g0688 1114 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 480 574 - -
Psa4g0688 1114 MobiDBLite consensus disorder prediction 340 355 - -
Psa4g0688 1114 MobiDBLite consensus disorder prediction 494 553 - -
Psa4g0688 1114 PRINTS DnaJ domain signature 147 165 IPR001623 -
Psa4g0688 1114 PRINTS DnaJ domain signature 165 180 IPR001623 -
Psa4g0688 1114 PRINTS DnaJ domain signature 181 201 IPR001623 -
Psa4g0688 1114 MobiDBLite consensus disorder prediction 412 438 - -
Psa4g0688 1114 Gene3D DnaJ domain 142 278 IPR036869 -
Psa4g0688 1114 PANTHER - 65 476 - -
Psa4g0688 1114 PANTHER - 571 1112 - -
Psa4g0688 1114 PANTHER - 480 574 - -
Psa4g0688 1114 SMART dnaj_3 144 201 IPR001623 -
Psa4g0688 1114 Pfam Domain of unknown function (DUF3444) 887 1092 IPR024593 -
Psa4g0688 1114 Pfam Domain of unknown function (DUF3444) 589 793 IPR024593 -
Psa4g0688 1114 MobiDBLite consensus disorder prediction 502 532 - -
Psa4g0688 1114 ProSiteProfiles dnaJ domain profile. 145 209 IPR001623 -
Psa4g0688 1114 MobiDBLite consensus disorder prediction 827 864 - -
Psa4g0688 1114 CDD DnaJ 145 198 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0688 Psa-Chr4 43657649 43662195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0688 82 308 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.190 5.55e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0688 - - mtr:MTR_4g118660 1410.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0688 4 43657649 43662195 Psa4g0688 4 43657649 43662195 ECH
Psa4g0688 4 43657649 43662195 Psa1g4271 1 338500622 338504813 PCT