Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0636 ATGGAGGACCCTCAATATCTAAACAGCCATCCTCCACAGTATCAACACCAACGCGCTTCCGTTCCTACTCCACCGTCGCATCAGTCCGACAATGATCACACTACCGCAGAGTTACGCGCTCTCGATTGCAACCTCGCTTCCCTCTGCGAACATGTCCAAATTGAAGGTTTCAATTCCGGCTCTTTCTCCGATATCGTCGTTAATGCTATGGGCTCCGCTTATCACCTCCATCGTCTCATCCTCTCTCGTAGTTCATATTTCAGGAACATGCTTCATGGTCCATGGAAAGAAGCCAGTGCTCCTATAGTGACCCTACACATTGATGATAAGAATGTTAATGAGGAGGCTATTTCAATTGCTTTGGCGTATCTTTATGGGAACCACCCTAAACTTAATGACGATAATGCCTTTCGTGTCCTTGCTGCCGCTTCCTTTCTTGACCTTCAGGATTTATGTGCTATATGTACAGATTTCATTATATCTGAGCTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCTGAGAACCAAGATTACGGCATTCATGGGGAGCGTGTTAGAACTGCTTGTTGGGGATACCTTTGTCAAAGTGGCGGCATAGAATTGAGAGAGGTGCTTCCTAAACTTTCATCTAATACATTACATGCATTACTGACCTCTAATGACCTGTGGGTACCCTGTGAAGAGAAGCGGTTTGAATTGGCTTTGCATACATTCCTGGCAAAAAGTGCTCACTCCAAGATTGAACATCCTGCACATGGAGTTCCTGGTTCGGAGTTGGCAACTGGCATTCATTCTGATAACACCAAAGGAAAAGAGCTTGCAGACTCAGTAGTAGACTTCAACAGTGACATTTCTGATTCCAATCAACAAGTTCAACTTGCTTCATATGTCAGTTCACCAAACATGAATCCAAGATATTCTTGTGACATGGAAGGGCCTTCATTGGGAAATTCATTGTCTGACACAGATGGGGCGAGAACACCATGTTATGTTGAGGGGCCTCTTGGTGCCGAAGTAACTACTGGAGTGGGTATTGAAGGGCCATCTGAGGAAGGACCTTGCTACCTTTCGGATAACAGCAATAGGCTGGTGAGGGATCAATCAAGACATTGTTTTTCAACGAGTTCTTGTAATGGGCTCACATCCAGTGAGTGGGGAAGGTATGGAGCACCTTTGCTCTCATGGGGTGGCCATGTTGGCAGAAGACAGGTCAAAGCTCATTCCAGAGGAAACTATGGAGATGAAGACAATGTATTTCTTAATATATTTGAAGGGGGCTCACTTTTATATTGCAGTATGTCTTTTGATGCACTTTTAAATGTCAGAAAGCAGCTTGAAGAGATAGGATTCCCTTGCAAAGCTGTAAATGATGGTTTGTGGCTGCAGATGCTTCTTAGTCAGAGGGTACAAGATATTGCTGCCGATACATGCAGAGTTTGTTCCCTTATGACTATGTCTTGTACTTGCCACAAGCAGTTTGCATTTGTACATGGGTCTACTACCACTGGATCTTACATGCAAGAACATAATCATAACAACATGCCTGGGGGTGGAGGAAATATATATGTCGCTGAATCTTCTACAGGCGAAAGAAATGGCTCCTTTAGACCTGTACGAGTACATGTTAGAGGTGCTAATGATGGGCTTGCAGGCATTGGCCGTGGGACTACATTTGTTCCTGCGGCGGCTTCACCTCCTACACGATTTGTCTTTTCTCGTGTACCATTTGGCATTGGCAACAGAAACTACCCTCAATCTGCTGCCAATGACGATTCAGACACACGTGCTGATCACAACGGAGACCTGTCTGGAGATGGATTGACAGCTTTAGTTGGGCTAAGCCAGGGAGGGAATTATGGAACCAATGTACACACAGAGCTAATACAAAGGGGGCACGAAATTGCCTTGCAAAGTACTGCTGGAGGTGCAAGTAGTGGTGGCATTCCAGTACAAATGTTAGAGAGACCAGAACATACCATTGGTATAGAATGGGAGAATGAAAACAGCTCTTCTATATCATTGGATTTGAAAACACCTTTAAGCCATTTCCCCCCTTTCCGCTTTGGTGTAAGTTTTGAGGAAGTACACAGGCTTAGTGATGGCCAGGTCAAGCATTCACCAGAAGTTTTCTATGCTGGTTCTTTATGGAAGGTCAGTATTCAGGCTTTTAATGATGAAGATCCCCAAGGACGGCGCACCCTAGGGTTATTTCTTCACCGTCGGAAGGCAGAGATAACTGATTTACACAGGAAGGTACATATGTATGTTGACTCACGTGAAAAGGTGACCGCCCGATATCAGTTGACTTGCCCATCCAAGAGGGAAATGTTGGTGTTTGGAAGCTTTAAACAAACAGGCACTCTTCTACCCAAAGCTCCGAAAGGATGGGGTTGGCGAACTGCTTTGCTATTTGATGAGCTTGCTGATCTTCTCCAAAACGGGGCCCTAAGGGTTATTGCTGTAGTGCAGCTCGTTTGA 2484 0.4505 MEDPQYLNSHPPQYQHQRASVPTPPSHQSDNDHTTAELRALDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSAYHLHRLILSRSSYFRNMLHGPWKEASAPIVTLHIDDKNVNEEAISIALAYLYGNHPKLNDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGIELREVLPKLSSNTLHALLTSNDLWVPCEEKRFELALHTFLAKSAHSKIEHPAHGVPGSELATGIHSDNTKGKELADSVVDFNSDISDSNQQVQLASYVSSPNMNPRYSCDMEGPSLGNSLSDTDGARTPCYVEGPLGAEVTTGVGIEGPSEEGPCYLSDNSNRLVRDQSRHCFSTSSCNGLTSSEWGRYGAPLLSWGGHVGRRQVKAHSRGNYGDEDNVFLNIFEGGSLLYCSMSFDALLNVRKQLEEIGFPCKAVNDGLWLQMLLSQRVQDIAADTCRVCSLMTMSCTCHKQFAFVHGSTTTGSYMQEHNHNNMPGGGGNIYVAESSTGERNGSFRPVRVHVRGANDGLAGIGRGTTFVPAAASPPTRFVFSRVPFGIGNRNYPQSAANDDSDTRADHNGDLSGDGLTALVGLSQGGNYGTNVHTELIQRGHEIALQSTAGGASSGGIPVQMLERPEHTIGIEWENENSSSISLDLKTPLSHFPPFRFGVSFEEVHRLSDGQVKHSPEVFYAGSLWKVSIQAFNDEDPQGRRTLGLFLHRRKAEITDLHRKVHMYVDSREKVTARYQLTCPSKREMLVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0636 827 SUPERFAMILY POZ domain 57 161 IPR011333 -
Psa4g0636 827 Pfam BTB/POZ domain 57 161 IPR000210 GO:0005515
Psa4g0636 827 MobiDBLite consensus disorder prediction 8 31 - -
Psa4g0636 827 Gene3D Potassium Channel Kv1.1; Chain A 31 196 IPR011333 -
Psa4g0636 827 MobiDBLite consensus disorder prediction 1 33 - -
Psa4g0636 827 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 16 827 - -
Psa4g0636 827 SMART BTB_4 63 163 IPR000210 GO:0005515
Psa4g0636 827 ProSiteProfiles BTB domain profile. 63 133 IPR000210 GO:0005515
Psa4g0636 827 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 16 827 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Psa4g0636 BTB 3e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0636 - - gmx:100806711 1360.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0636 4 39292870 39301615 Psa4g0636 4 39292870 39301615 ECH