Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0602 ATGGTAATAACTGAGGAGAGAAACATGCTTGGTCCTGAAGGAGAAATTAAAATAAGTTTTGGTTATAAATGCAATAATGATAGAGGTATTTCTAGCGAGATCGCTAATGGGTACAAAAATCATCCCGAAATCCGTAGAACAAGTAGTTTCTCTTGTTTATCTGGTGCAGCCTTAAGTGCAAATGCTACACTAGCCAACACAAACATCTGCAATGGTAAGATAGGTGGAGAGATCCTTCCAAGTTGGGACTCTCCTAACTCGTTTCGTAGAGTACCTTCTTCGCCAAGTCTTTCACGATTCGACAGACTATCGTCTTCCCTCCCAAATAGTCTCTCTTACCTTAGTTGCAGTCCATTAACTGCTAGTGACAGCCTTGAATATGAAAAATCTGCAAGTGATCGTTCGAGCAGCGACGGATTTCTTATTGCCACAGAAGTTCAAGTAGCAGGAGGAGCTGCAGGCGAAGATAGAGTTCAAGCTGTTTGTTCTGAAGAAAATGGCTGGCTCTTTTGTGCAATTTACGACGGTTTTAATGGAAGAGATGCTGCTGATTTTTTAGCAGGTACACTTTACGACACCATCATATCGTATCTAGATAAGTTAATTTGGGAATTGGAGCCAGGTTCCATCGCAGCTCCCCATCACACGGATTTGGGAGAATTCTTTCCATATAAGATGGATGACAGTCTTCATTGTCACCAGGATCGTTCTCAGTCAAGAACAACGCGCAAATCTTTTTCACTCGGGGTGCTTGATAGCCTCGATCGTGCTCTTAGTCAGGCTGAGAATGATTTCTTATACATGGTTGAGCAGGAAATGGTGGAACGTCCGGATTTAGTTTCGATTGGATCTTGTGTTCTGCTTTTGCTTCTTCATGGTAATGATTTGTATACGTTGAATCTCGGCGACAGTAGAGCAGTATTGGCGACATGCAGTAACTGTGACAGAATGAATAAGAGTGAGAGACTCAAGGCTATACAGCTTACAGATAATCACACTGTCGATAATGAAGCTGAAAGAGCTAGACTCATTGCGGAACATCCCGATGATCCTAAGGTCGTCATAGCAGGAAAAGTGAAAGGTAAATTGAAGGTTAGTCGCGCATTCGGAGTTGGCTACTTAAAAAAGAAAAATCTGAATGATGCTTTGATGGGAATCCTTAGAGTTCGCGACCTTACGAGTCCACCATATGTTTCCACTCAACCATCACTAAATGTCCATAAAATCTCGAATTTCGATCAATTTGTTATACTAGGGAGTGATGGTTTATTCGACTTCTTCAGCAATGACGAGGCGGTGAAACTTGTAGAGTCTTACATCTTAAGCAACCCTTTTGGTGATCCTGCAAAGTTTCTCATAGAGCAACTTGTAGCTAGAGCAGCTGATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCGCCCGGGAGGAGAAGAAAGTACCATGATGATGTTACTGTTATAGTGATCATGCTTGGGATGAATCAACGGACTTCAAAAGCTTCAACTTGCATCTAA 1521 0.4208 MVITEERNMLGPEGEIKISFGYKCNNDRGISSEIANGYKNHPEIRRTSSFSCLSGAALSANATLANTNICNGKIGGEILPSWDSPNSFRRVPSSPSLSRFDRLSSSLPNSLSYLSCSPLTASDSLEYEKSASDRSSSDGFLIATEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYLDKLIWELEPGSIAAPHHTDLGEFFPYKMDDSLHCHQDRSQSRTTRKSFSLGVLDSLDRALSQAENDFLYMVEQEMVERPDLVSIGSCVLLLLLHGNDLYTLNLGDSRAVLATCSNCDRMNKSERLKAIQLTDNHTVDNEAERARLIAEHPDDPKVVIAGKVKGKLKVSRAFGVGYLKKKNLNDALMGILRVRDLTSPPYVSTQPSLNVHKISNFDQFVILGSDGLFDFFSNDEAVKLVESYILSNPFGDPAKFLIEQLVARAADSAGFSMEELMNVPPGRRRKYHDDVTVIVIMLGMNQRTSKASTCI* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0602 506 Pfam Protein phosphatase 2C 232 457 IPR001932 -
Psa4g0602 506 SMART PP2C_4 129 491 IPR001932 -
Psa4g0602 506 PANTHER PROTEIN PHOSPHATASE 2C 6 505 IPR015655 GO:0004722|GO:0006470
Psa4g0602 506 SUPERFAMILY PP2C-like 153 494 IPR036457 -
Psa4g0602 506 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 6 505 - -
Psa4g0602 506 ProSiteProfiles PPM-type phosphatase domain profile. 140 493 IPR001932 -
Psa4g0602 506 CDD PP2Cc 153 491 IPR001932 -
Psa4g0602 506 Gene3D - 118 502 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0602 Psa-Chr4 37238146 37240799 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0602 12 506 PP2C-type Phosphatase Gene Family AT3G16560 62.672 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0602 - - gmx:100808304 791.186