Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0596 ATGAATTCCAATTACGGCAAATCAAATCCCCAAAAATCATCACCTTCCGTTTCTCTCAATAATTTCAATTTCGATCTTGATCTCGGCATCGGATCCAATCGATCCAAATCCCTAAAAGATCAGAAAAACCCCAATCCTTCCTATTCCAATTCATATTCATCGGCGCAACCCAAAAAAACCGCATGGACCCACCAACCCACTCAAACTCCGGCCGGATTACCCGGTGCACCACCGTCCATGGTTGGAGACATCTTCGGTAAGAGCTGGGGATCTACTCAACCTTCCGGTCCTAGCATTGGAATCGTTAATAAAAACCCTAATCTATTTGGAGATTTGGTAACCTCTGCTTTGGGTCAAGGTTCTTCTTCTTCTTCGAATGTTCCTCTGAAAAATGCTACTCCAGCACCTAATAAATCCTCTTTTTCAATGTCAAATATGGCGAATTCTTTGCCTAAAAATTCTAATACGCCACAAAGTGGTTCTACTTGGGGATCATCATCTTCTGGGAGCTTTAATTTGAATGCTAATCAAAAACCCAATCTTGGTGGTCCTTCGATTCGAAGTGGCGTTGGTGTTGCTGCATCTGGTAGTGGAATTGGAATCAGTTCTAGTAACAAAGATCCTTTTAGTTCGTTGGGTAGTTTTGGATCTAAGCCATCTTCTAGTCTTAATTCAGCTGCTAAACCTCAGAAGGTTGATTCAGAAGATGATGGGTTTGGTGATTTTCAGAATGCTTCAAAACCGAGCTCGAATGTGTTTCCATCAAGTGGTAGTAGTGTTGGAATTGATGTTGATTTTACTGGATCTTCGGCTTTTTCGAATAGGAGTCCTCCGGTTCAAGCTTCTTCCGGTGGTGGTGATCCGATGGATATGTTTTTCACATCTTCAACTGCTTCTTCTGGAGGTGGTGGTGGTGGTGCTGCTTCTGCTGCTGCATCTTCGGAAATTGATGATTGGGGTACTGAGTTTGGAGGTGGAAACCATGATGTGGGTGGAACAACTACCGAACTTGACGGGCTTCCACCTCCCCCTGCTGGGATATCAGGTTCTACTGCTAAAGGCAAAGGGATGGATAATTACAAACAGGGACAATTTGCTGATGCTATTAAATGGCTTTCATGGGCTCTCATCCTTTTGGAGAAAGCTGGAGATGATGCTGGCACGGTGGAGGTTTTGTCATGCAGAGCTTCTTGTTACAAAGAAGTTGGAGAGTATAAAAAAGCAGTGGCTGATTGTACACAGGTTATTGGAAACAACCAAAAAAATGTAGCTGTCCTCGTTCAGCGAGCTCTCTTGTATGAAAGTATGGAAAAGTACAAACTTGGTGCTGAAGACCTGAGAACCGTGCTGAAGATTGATCCTACCAACCGGGTTGCTAGAAGTACTGTTCACCGGTTGGCTAAGATGGCTGAATAG 1416 0.4371 MNSNYGKSNPQKSSPSVSLNNFNFDLDLGIGSNRSKSLKDQKNPNPSYSNSYSSAQPKKTAWTHQPTQTPAGLPGAPPSMVGDIFGKSWGSTQPSGPSIGIVNKNPNLFGDLVTSALGQGSSSSSNVPLKNATPAPNKSSFSMSNMANSLPKNSNTPQSGSTWGSSSSGSFNLNANQKPNLGGPSIRSGVGVAASGSGIGISSSNKDPFSSLGSFGSKPSSSLNSAAKPQKVDSEDDGFGDFQNASKPSSNVFPSSGSSVGIDVDFTGSSAFSNRSPPVQASSGGGDPMDMFFTSSTASSGGGGGGAASAAASSEIDDWGTEFGGGNHDVGGTTTELDGLPPPPAGISGSTAKGKGMDNYKQGQFADAIKWLSWALILLEKAGDDAGTVEVLSCRASCYKEVGEYKKAVADCTQVIGNNQKNVAVLVQRALLYESMEKYKLGAEDLRTVLKIDPTNRVARSTVHRLAKMAE* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0596 471 SUPERFAMILY TPR-like 353 461 IPR011990 GO:0005515
Psa4g0596 471 MobiDBLite consensus disorder prediction 212 235 - -
Psa4g0596 471 MobiDBLite consensus disorder prediction 149 168 - -
Psa4g0596 471 Gene3D Tetratricopeptide repeat domain 349 471 IPR011990 GO:0005515
Psa4g0596 471 MobiDBLite consensus disorder prediction 1 20 - -
Psa4g0596 471 PANTHER OS03G0340700 PROTEIN 1 471 - -
Psa4g0596 471 MobiDBLite consensus disorder prediction 33 70 - -
Psa4g0596 471 SMART tpr_5 389 422 IPR019734 GO:0005515
Psa4g0596 471 SMART tpr_5 423 456 IPR019734 GO:0005515
Psa4g0596 471 SMART tpr_5 349 382 IPR019734 GO:0005515
Psa4g0596 471 MobiDBLite consensus disorder prediction 33 77 - -
Psa4g0596 471 MobiDBLite consensus disorder prediction 212 229 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0596 364 471 Calmodulin-binding Proteins AT3G25230 29.464 2.29e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0596 - - vun:114178472 590.112