Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0592 ATGGCAAAAAGGCTTCTGTTTAACGACACTGATCATGTTGGAGTGTTCTGTAAACTTACCAATACCTACTGTTTGGTCGGGGAAGGTTCCGATGACTTCTACAGTGAAGTTGTTGCCAAATTTGAAGATATTATCCCTGTCATTAAAACCTCCATTGCCGGCACTAGTTGGGTTGGTCGTTATTGTATTGGAAACAAGAACGGGCTTCTCTTGCCCCATACAACCACACCTGAAGAATATCAGCATATAAAAAGAAGTCTACCTCATGCAACTGTTGTGCGGCGCATCCCAGAAGGATTGACTTGTTATGCAAGATTTATAGCATGTAATGACCATGTTGCCTTTGCGCACACTGATTTTCACCAGGAAGTGGAGGAGTTGCTCAACGATGTCCTTAAGGTAGAGGTTTTCAAGCCGAAGAAATCTTGTAGTTTTATTTCTGGAACATACTGTGCCCTGTCCAACATAGGTGGTTTGATCCACCCCCATGCTACCACGACCAAAGAAGTCTTGGATGAACTTTCTGAAAATCTTGAAGTTCCTTTTGAAGCTGGGACCGTCAATGATGGCAGCGAAACTTTATTTCCTGGTATAACAGTAAATGATTGGACAGGCTTTTGTGGTTCAACCACCACAAGTGCAGAGCTGCATGTGATTAATAGAGTCTTCAAGCTGAGGAAACCCTAG 687 0.4309 MAKRLLFNDTDHVGVFCKLTNTYCLVGEGSDDFYSEVVAKFEDIIPVIKTSIAGTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDFHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPHATTTKEVLDELSENLEVPFEAGTVNDGSETLFPGITVNDWTGFCGSTTTSAELHVINRVFKLRKP* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0592 228 SUPERFAMILY Pentein 1 225 - -
Psa4g0592 228 PIRSF Transl_init_IF-6 1 227 IPR002769 GO:0042256|GO:0043022
Psa4g0592 228 SMART eIF6neu2 3 205 IPR002769 GO:0042256|GO:0043022
Psa4g0592 228 TIGRFAM eIF-6: putative translation initiation factor eIF-6 5 224 IPR002769 GO:0042256|GO:0043022
Psa4g0592 228 Hamap Translation initiation factor 6 [eif6]. 1 228 IPR002769 GO:0042256|GO:0043022
Psa4g0592 228 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 227 IPR002769 GO:0042256|GO:0043022
Psa4g0592 228 Pfam eIF-6 family 5 204 IPR002769 GO:0042256|GO:0043022
Psa4g0592 228 Gene3D - 1 226 - -
Psa4g0592 228 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0592 Psa-Chr4 36846779 36856237 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0592 1 228 Eukaryotic Initiation Factors Gene Family AT3G55620 56.332 1.52e-90 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0592 K03264 - rcu:8275684 263.848