Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0576 ATGGGACAAGAATCAGATTCCAAAGCCAAGTTGGTGTTAGAGATTTGTTCCATTTCCACTCGTTCTGCAACATGTGTTCATACCATTCTTTCAAACCCAACCAACACAACTTTCATTGACTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGGTGAATTTCATTCGCAAGAGATACCGTAAATTGGCTTTGCAGCTTCACCCAGATAAGAACAAACATCCAAAAGCTGAAATTGCCTTCAAGCTTGTTTCTGAGGCAAATGCATGTCTAACTAATGCAGCAAAGAGAGAAGCTTTTGATTTTGCAAGGTGCAAGCATTTCTGCATTGAATGCAAGAAAATTCCATATACAACAGACAATGTTTCTGTCAATTCCAATGGTTCAAGTTGGAAGGCATGGAATATTATGACAAGGTCAAGATCTTTAAAGTTTTGGAGAAATATTAGGGATATTAGAGAGAGATTTAAGGAGGAAGCTAATGTGATTGAGAATTGTTTGAGAGTAAATTCAATGTCAAGGACAGAATCTCCACTCTACAATCCAGATAGTTATCTAGATAGAAGCAAGTCACATAGAAGCAAGTCACAGAATAGATTTGATAAAGATACCCCTATTTTCAATCCTTCAGATTACTCATACCAAGATTATCCTCATATGAGAGGCCATGTTAACAGGAATTCTTCCACATTTTGGTATTTGCAGACAAATAGTATGCTGCACAATGAAAAGAGAGGACCGCAGCTTAGCTCCCCTGTTTTTGAGGTCAAAAGTAGGAGTATGTTTACAAACCAATTTGCTTTTGTACCATCAAGATATTAG 822 0.3747 MGQESDSKAKLVLEICSISTRSATCVHTILSNPTNTTFIDWYCILGVEENAGVNFIRKRYRKLALQLHPDKNKHPKAEIAFKLVSEANACLTNAAKREAFDFARCKHFCIECKKIPYTTDNVSVNSNGSSWKAWNIMTRSRSLKFWRNIRDIRERFKEEANVIENCLRVNSMSRTESPLYNPDSYLDRSKSHRSKSQNRFDKDTPIFNPSDYSYQDYPHMRGHVNRNSSTFWYLQTNSMLHNEKRGPQLSSPVFEVKSRSMFTNQFAFVPSRY* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0576 273 SMART dnaj_3 39 96 IPR001623 -
Psa4g0576 273 PRINTS DnaJ domain signature 42 60 IPR001623 -
Psa4g0576 273 PRINTS DnaJ domain signature 60 75 IPR001623 -
Psa4g0576 273 PRINTS DnaJ domain signature 76 96 IPR001623 -
Psa4g0576 273 Pfam DnaJ domain 40 101 IPR001623 -
Psa4g0576 273 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 260 - -
Psa4g0576 273 MobiDBLite consensus disorder prediction 186 200 - -
Psa4g0576 273 SUPERFAMILY Chaperone J-domain 28 104 IPR036869 -
Psa4g0576 273 Gene3D DnaJ domain 39 160 IPR036869 -
Psa4g0576 273 PANTHER BNAC03G44070D PROTEIN 4 260 - -
Psa4g0576 273 MobiDBLite consensus disorder prediction 183 202 - -
Psa4g0576 273 CDD DnaJ 40 87 IPR001623 -
Psa4g0576 273 ProSiteProfiles dnaJ domain profile. 40 104 IPR001623 -
Psa4g0576 273 ProSitePatterns Nt-dnaJ domain signature. 81 100 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0576 Psa-Chr4 34923731 34925412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0576 40 101 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 42.424 2.42e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0576 - - gmx:100801809 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0576 4 34923731 34925412 Psa1g3560 1 305799470 305801096 PCT