Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0556 ATGAGTTATTCAAGAAAGATCCAATCACAGGAGAATCATCATCACTACCTAGGTAGCTTCATTTTAGGGAGAAGAATGGCCAACAACAAGGTTGTTATCAGAGAGTTTGATGAAGATAGAGATGTTAAGGTTGTAGGGAACCTTGAAAGAAACTGTGAGATTGGAACTACTAAAAAGGGTTTCTCCATTTTCACCAACATCATCACTGACCCTTTATCTAGGATTAGGTTCTATCCCATTCATGTTATGTTGGTTGCTGAGCTTGTTGAATGTAGGGAGCTTGTTGGAGTTGTTAGAGGATGCATTAAAAGTGTGCAAACTTCCTCTGGATCACTCTTCAAGATGGGTTGCATACTAGGCCTTAGAGTCTCTCCTACACACAGGAGAAAGGGGGTTGGACTAAAACTTGTGAGCTCCATTGAAGAATGGATGCTAAGAAATGGTGCTGATTATGCATTTCTAGCCACAGAAAAGAGCAACAATGCTTCCAAAAACCTATTCACCAACAAATGCAACTATGTCAATCTCAGTTCACTTATCATATTTCTCCACCCAACTACTTTCCCTATAACAAACCACATTTCCGAGGATATCAAAATAGACAAAATAAATATAGACCAAGCAATTTTGTTCTACACAAGACTCTTGAAAACCAAAGATTTGTATCCATTAGACATGGACATTATTCTCAAAGAGAAACTCAGTTTAGGAACTTGGGTTAGTTATTACAAAGATCAAGACTTCAAACTCAACGGCGCCGAAGACATTCTTACCGATAAAATCACAACAAACTCGTCATGGATCATTTTTAGTTTATGGAACACTTGTGAAGCTGATGATAACAATAACAACAACAATAATAATAAAAATAATAATAATAACGTTCAAGATGTTAAAACAAAGTTATCTCAACCACTTAAGTTTCTTCATGCGACATTTAGTCATGCAAAGGACAAAATATGTCCGTGTCTAAGAATGTTGACGAATGAGTCATTAATGTGTAATAATGATAATAACAGTTTCGGGTTTCTTTTTGTTTATGGAGTTCATGGAGAAGGAGAGAATCTTGGAGGGTTAATGGAATCAGTATGGAGGTTTACATCAAGAATAGGAGAAAAGTTAAAGGAATGTAGAGTTGTGATAACTGAATTAGGGTTTGGTGATCCAGTTATAAACCATGTTCCTCGAGTGGATTCCATGACTTGTGTTGATGATATGTGGTATAAAGATAAAGCTGGTGTTACACTTGAGGAAGATATGCATATATATTCTAGATTGCAGGAATGA 1287 0.3629 MSYSRKIQSQENHHHYLGSFILGRRMANNKVVIREFDEDRDVKVVGNLERNCEIGTTKKGFSIFTNIITDPLSRIRFYPIHVMLVAELVECRELVGVVRGCIKSVQTSSGSLFKMGCILGLRVSPTHRRKGVGLKLVSSIEEWMLRNGADYAFLATEKSNNASKNLFTNKCNYVNLSSLIIFLHPTTFPITNHISEDIKIDKINIDQAILFYTRLLKTKDLYPLDMDIILKEKLSLGTWVSYYKDQDFKLNGAEDILTDKITTNSSWIIFSLWNTCEADDNNNNNNNNKNNNNNVQDVKTKLSQPLKFLHATFSHAKDKICPCLRMLTNESLMCNNDNNSFGFLFVYGVHGEGENLGGLMESVWRFTSRIGEKLKECRVVITELGFGDPVINHVPRVDSMTCVDDMWYKDKAGVTLEEDMHIYSRLQE* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0556 428 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 27 419 - -
Psa4g0556 428 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 27 419 - -
Psa4g0556 428 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 26 168 IPR016181 -
Psa4g0556 428 CDD NAT_SF 83 154 - -
Psa4g0556 428 Pfam Acetyltransferase (GNAT) family 92 173 IPR000182 GO:0016407
Psa4g0556 428 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 31 235 IPR000182 GO:0016407
Psa4g0556 428 Gene3D - 38 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0556 Psa-Chr4 34077292 34079333 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Psa4g0556 Acetyltransf_1 3.4e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0556 - - gmx:100814448 514.998