Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0529 ATGAAGATTCAACATGCCTTCCGCAATTTTGAGACCAAGAAAGTCATGGCTGCTGCTGCTCGCATACAATATAGATTCCGTACATGGAAGATTCGCAAAGATTTCCTCAACATGCGCCGTCAAGTTATCAAGATTCAAGCTGCTTTCCGGTGCTTTCAACAACGGAAACATTATCGTAAAATTCTTTGGTCAGTTGGTGTGGTTGAGAAAGCACTGCTACGTTGGCGTTTAAAGAGAAAGGGCTTCCGTGGGCTCCAGCTTAATACTGCAGAAACAGAGGGAGATCAGAATCAGCAAAGTGATGCAGAAGAGGAATTCTTTAAAACTGGTAGGAAACAAGCTGAAGAACGCGTTGAGAGAAGTGTAATACGAGTGCAGGCTATGTTCCGTTCCAAGAAAGTGCAAGAAGATTACAGGAGGATGAAGTTGGCACTTAATCAAGCAAAGATGGAACGGGAATATGAAAAGTAG 471 0.431 MKIQHAFRNFETKKVMAAAARIQYRFRTWKIRKDFLNMRRQVIKIQAAFRCFQQRKHYRKILWSVGVVEKALLRWRLKRKGFRGLQLNTAETEGDQNQQSDAEEEFFKTGRKQAEERVERSVIRVQAMFRSKKVQEDYRRMKLALNQAKMEREYEK* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0529 156 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 156 - -
Psa4g0529 156 Gene3D - 12 62 - -
Psa4g0529 156 ProSiteProfiles IQ motif profile. 38 62 IPR000048 GO:0005515
Psa4g0529 156 Pfam IQ calmodulin-binding motif 40 59 IPR000048 GO:0005515
Psa4g0529 156 Pfam IQ calmodulin-binding motif 17 35 IPR000048 GO:0005515
Psa4g0529 156 ProSiteProfiles IQ motif profile. 16 44 IPR000048 GO:0005515
Psa4g0529 156 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 156 - -
Psa4g0529 156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 65 IPR027417 -
Psa4g0529 156 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
Psa4g0529 156 SMART iq_5 117 139 IPR000048 GO:0005515
Psa4g0529 156 SMART iq_5 14 36 IPR000048 GO:0005515
Psa4g0529 156 SMART iq_5 37 59 IPR000048 GO:0005515
Psa4g0529 156 Coils Coil 131 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0529 Psa-Chr4 32622888 32623777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0529 1 151 CAMTA Transcription Factor Family AT3G16940 62.252 9.01e-59 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0529 K21596 - gmx:100793970 266.544