Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0528 ATGATAACCCCTCGTGTGAGCAAGATCAGCGGCAGTATATCCACCAGGGTTTTGTTACAAACGGAGGCGGTTGAGTTTTCCAGCCCAGAAGCTGAAGCACGCAAAATAGTTGCAGCAATGAAGATTCAACATGCCTTCCGCAATTTTGAGACCAAGAAAGTCATGGCTGCTGCTGCTCGCATACAATATAGATTCCGTACATGGAAGATTCGCAAAGATTTCCTCAACATGCGCCGTCAAGTTATCAAGATTCAAGCTGCTTTCCGGTGCTTTCAACAACGGAAACATTATCGTAAAATTCTTTGGTCAGTTGGTGTGGTTGAGAAAGCACTGCTACGTTGGCGTTTAAAGAGAAAGGGCTTCCGTGGGCTCCAGCTTAATACTGCAGAAACAGAGGGAGATCAGAATCAGCAAAGTGATGCAGAAGAGGAATTCTTTAAAACTGGTAGGAAACAAGCTGAAGAACGCGTTGAGAGAAGTGTAATACGAGTGCAGGCTATGTTCCGTTCCAAGAAAGTGCAAGAAGATTACAGGAGGATGAAGTTGGCACTTAATCAAGCAAAGATGGAACGGGAATATGAAAAGGTGATTAGTACTGAAGTTGACATGGGATTGAAGAGATAG 624 0.4407 MITPRVSKISGSISTRVLLQTEAVEFSSPEAEARKIVAAMKIQHAFRNFETKKVMAAAARIQYRFRTWKIRKDFLNMRRQVIKIQAAFRCFQQRKHYRKILWSVGVVEKALLRWRLKRKGFRGLQLNTAETEGDQNQQSDAEEEFFKTGRKQAEERVERSVIRVQAMFRSKKVQEDYRRMKLALNQAKMEREYEKVISTEVDMGLKR* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0528 207 Gene3D - 51 101 - -
Psa4g0528 207 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 17 207 - -
Psa4g0528 207 Pfam IQ calmodulin-binding motif 56 74 IPR000048 GO:0005515
Psa4g0528 207 Pfam IQ calmodulin-binding motif 79 98 IPR000048 GO:0005515
Psa4g0528 207 Coils Coil 170 190 - -
Psa4g0528 207 ProSiteProfiles IQ motif profile. 158 186 IPR000048 GO:0005515
Psa4g0528 207 ProSiteProfiles IQ motif profile. 55 83 IPR000048 GO:0005515
Psa4g0528 207 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 17 207 - -
Psa4g0528 207 ProSiteProfiles IQ motif profile. 77 101 IPR000048 GO:0005515
Psa4g0528 207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 104 IPR027417 -
Psa4g0528 207 SMART iq_5 76 98 IPR000048 GO:0005515
Psa4g0528 207 SMART iq_5 53 75 IPR000048 GO:0005515
Psa4g0528 207 SMART iq_5 156 178 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0528 Psa-Chr4 32621562 32622598 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0528 21 190 CAMTA Transcription Factor Family AT3G16940 59.412 8.66e-65 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0528 K21596 - gmx:100793970 306.219