Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0527 ATGGTCAATGACAGATTTCCGGTCTCTTCAATTGGTGTTGATTCCTTAAACACTTTGACCAATAACAGATTTCAAAGTCAGGACAGCTTTGGAAAGTGGGCGAACCAAATCATGTCTGATTCCCCTTCTTCAGTTGATGGTTCGGATCTCGTATCCTCAGTTTCATCCGGTGACGAATCGTATTCATCTTTGGTAGTTGAAGATCCGCAACTTTCCCTTCCAGAACAACTATTTAATCTCACCGATGTGTTCCCTGCATGGGTGTCTTCCACAGAGAAATCAAAGATCCTAGTGACTCGGCTCTTTCAAATAGACTATCTACACATCTCAAAGTCCAATCTAACATGTGTCTGTGGTGATGAAGTCGTTCCTGCAGAAATTGTTCAGGATGGGGTATACCGATGTTGGGTACCACCGCATTCTCCGGGATTCGTGAATCTCTACTTGAGCTTAGATGGACATAATCCTATCAGCCAAGTTGTTAATTTTGAGTATCGTACTCCTGTTTTGCACGCTCCAGTTGCTTCTGTGGAAGAAAAGAACAACTGGGACGAGTTTCAACTTCAGATGAGGCTTGCTTATTTGCTCTTTGCTAAACAGCAAAGCCTTGATGTCTTCTCTAGTAAAGTATCATCTAGTAGATTAAAGGAGGCAAGGGAATTCTCCTTAAAGACGTCATTTATTTCCAATACTTGGCAATACTTAATGGAGTCAACTTTAGATAACAAAATTCCATTTTCCCAAGCAAAAGATGCCCTGTTTGGAATTGCATTGAAAAACAGATTAAAGGAATGGCTTTCGGAAAAAATTGTTTTAGGATGTAAGACTACTGAATATGACGCACAAGGCCAAAGTGTCATCCATTTGTGTGCAATTTTGGGATATACATGGGCGGTTACTTTATTTTCATGGTCAGGCTTGTCGCTAGATTTCCGGGACAAATTTGGATGGACTGCTCTTCATTGGGCCGCATATCATGGAAG 983 0.412 MVNDRFPVSSIGVDSLNTLTNNRFQSQDSFGKWANQIMSDSPSSVDGSDLVSSVSSGDESYSSLVVEDPQLSLPEQLFNLTDVFPAWVSSTEKSKILVTRLFQIDYLHISKSNLTCVCGDEVVPAEIVQDGVYRCWVPPHSPGFVNLYLSLDGHNPISQVVNFEYRTPVLHAPVASVEEKNNWDEFQLQMRLAYLLFAKQQSLDVFSSKVSSSRLKEAREFSLKTSFISNTWQYLMESTLDNKIPFSQAKDALFGIALKNRLKEWLSEKIVLGCKTTEYDAQGQSVIHLCAILGYTWAVTLFSWSGLSLDFRDKFGWTALHWAAYHG 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0527 327 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6 327 - -
Psa4g0527 327 SUPERFAMILY Ankyrin repeat 256 327 IPR036770 -
Psa4g0527 327 Pfam IPT/TIG domain 80 165 IPR002909 -
Psa4g0527 327 Gene3D Immunoglobulins 74 169 IPR013783 -
Psa4g0527 327 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 6 327 - -
Psa4g0527 327 SUPERFAMILY E set domains 79 166 IPR014756 -
Psa4g0527 327 Gene3D - 245 327 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0527 Psa-Chr4 32575918 32582283 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0527 17 327 CAMTA Transcription Factor Family AT4G16150 51.923 1.04e-113 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0527 K21596 - gmx:100793970 472.626