Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0526 CTTACGGACAGCCGCTGATGCAGCTGCACGCATACAACAAGCATATAGGGAACATTCCTTAAAGTTACAAACGGAGGCGGTTGAGTTTTCCAGCCCAGAAGCTGAAGCACGCAAAATAGTTGCAGCAATGAAGATTCAGCCTGCCTTTCGTAATTTTGAGACAAAGAATGTCATGGCTGCTGCTGCTCGCATACAATATAGATTCCGTACATGGAAGATTCGTAAAGATTTCCTTAACATGCGCCGTCAAGTTATCAAGATTCAAGCTGCTTTCCGGGGCTTTCAAATACGGAAACAGTATCGTAAAATTCTTTGGTCAGTTGGTGTGCTTGAGAAAGCAATTCTACATTGGCGTATAAAAGACTTCCGTGGGCTCCAGCTTAATACTGCAGAAGTAGAGGGAGATCAGAATCAGCAAAGTGATGCAGAAGAGGAATTCTTTAAAACTGGTAGGAAACAAGCTGAAGATCGCGTTGAGAGAGGTGTAATACTAGTGCAGGCTATGTTCCGTTCTAAGAAAATGCAAGAAGATTACAGGAGGATGAAGTTGGCACTTAATCAAGCAAAGATGGAACGGGAAAATGAAAAGGTGATTAGTACTGAAGTTGACATGAGAATGAAGAGATAG 628 0.4252 LRTAADAAARIQQAYREHSLKLQTEAVEFSSPEAEARKIVAAMKIQPAFRNFETKNVMAAAARIQYRFRTWKIRKDFLNMRRQVIKIQAAFRGFQIRKQYRKILWSVGVLEKAILHWRIKDFRGLQLNTAEVEGDQNQQSDAEEEFFKTGRKQAEDRVERGVILVQAMFRSKKMQEDYRRMKLALNQAKMERENEKVISTEVDMRMKR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0526 208 ProSiteProfiles IQ motif profile. 159 187 IPR000048 GO:0005515
Psa4g0526 208 ProSiteProfiles IQ motif profile. 58 86 IPR000048 GO:0005515
Psa4g0526 208 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 208 - -
Psa4g0526 208 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 2 208 - -
Psa4g0526 208 Pfam IQ calmodulin-binding motif 59 77 IPR000048 GO:0005515
Psa4g0526 208 Pfam IQ calmodulin-binding motif 82 101 IPR000048 GO:0005515
Psa4g0526 208 SMART iq_5 157 179 IPR000048 GO:0005515
Psa4g0526 208 SMART iq_5 79 101 IPR000048 GO:0005515
Psa4g0526 208 SMART iq_5 56 78 IPR000048 GO:0005515
Psa4g0526 208 Coils Coil 171 191 - -
Psa4g0526 208 ProSiteProfiles IQ motif profile. 80 104 IPR000048 GO:0005515
Psa4g0526 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 107 IPR027417 -
Psa4g0526 208 Gene3D - 55 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0526 Psa-Chr4 32573217 32574259 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0526 10 191 CAMTA Transcription Factor Family AT3G16940 57.297 1.24e-62 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0526 K21596 - gmx:100793970 298.13