Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0518 GGCGAAACCAAAGAAGACAGACAAGAAGAAGCAAAAGCCGAATAGAGTTATTTTCAAGACACAAACTGAACTTGATCACTTAAATGATGGTTATAGGTGGCGCAAGAGCTATTACCGTTGCACCATCCCCGGTTGTGAAGTGAAGAAGCACATAGAGCGTTTCGGGCCCAAGCCTTCCATGCTACTAATCTCTTATGAAGGCGACCACACCCACCTAGCTCCAAAGTTGCAACCACAACAGTTCCAGAACCCGAATCAGATTATGATTCCCCATCAACCTGCATTTCCTCAATTGCCATACAATAATAGTTATAATAGCTCCTTCAACGTCCCTCCAACTTCAAACATTGTTAACTATGCTAACAATTGTCTACCTTTGAATGTTGTTCATTCTTCTGCTGCTAACAATTCTCCAACTTTGAATGTTGTTAACCCTACTAACAACTTTCCACCTTTGAATGTTGTTAACACTGCTGCTGCAGACAATTTTCCACCTTTGGATGTTGTTAATCCTGTAGCTGCTGAAAATTCTCCACCTTTAAATGTTGTTAGTTCTGCTGGCAATTTCTTCAACTCTTCGACATCATTTGGTGAATTTCATCAAAATATAGGTGGATGCAATTTTTCAATGTTGACAGATAATTTGATAAGCAAGGATGGACTTCTTCAGGACATGATCATGCCAAGGGAGACGAGAGGAGCTTGGGCTGAAGCTGGAGTTGGAGCTGGAAGATGA 736 0.413 AKPKKTDKKKQKPNRVIFKTQTELDHLNDGYRWRKSYYRCTIPGCEVKKHIERFGPKPSMLLISYEGDHTHLAPKLQPQQFQNPNQIMIPHQPAFPQLPYNNSYNSSFNVPPTSNIVNYANNCLPLNVVHSSAANNSPTLNVVNPTNNFPPLNVVNTAAADNFPPLDVVNPVAAENSPPLNVVSSAGNFFNSSTSFGEFHQNIGGCNFSMLTDNLISKDGLLQDMIMPRETRGAWAEAGVGAGR* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0518 244 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 2 135 - -
Psa4g0518 244 SUPERFAMILY WRKY DNA-binding domain 20 73 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa4g0518 244 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 2 135 IPR044810 GO:0003700
Psa4g0518 244 SMART WRKY_cls 27 73 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g0518 244 ProSiteProfiles WRKY domain profile. 22 74 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g0518 244 Pfam WRKY DNA -binding domain 34 71 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g0518 244 Gene3D WRKY domain 12 75 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0518 Psa-Chr4 32375763 32376873 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0518 2 74 WRKY Transcription Factor Family AT2G47260 47.674 5.49e-22 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa4g0518 WRKY 2.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0518 - - mtr:MTR_4g122530 115.931