Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0513 ATGGGAAGAAAAGATAGTATAACGGCTAGCAAGGTAGGAGCAAATAATAACATTCCAGGTCCAAACTCAACCGTTGATGTACTTGTGTCCAAGTTTGAAAATGTTGGCCTTACACTTCAAGACATGGTTGCACTTTCAGGTGCACATACAATAGGAAAAGCCCGGTGCTCAACATTTAGTTCTCGATTACAGAGCAACAGCATTTCAGATGGTTCATATGTTGATGTGGAATTTGTTGCATCGTTGCAACAGTTGTGCTCAGGACAAGGTAATAGCAACCGAATTGCACATTTGGACCTGACCACACCAGCTACATTTGATAACCAATATTATGTTAACCTTCTCTCTGGGGAAGGACTGCTTCCATCAGACCAGACCCTGGTGAGTGGGAATGATCAGACACGGCAGATTGTTGAAACCTATGTAGAGAACCCGTATGCTTTCTTTGAAGACTTCAAGATTTCAATGATAAGAATGGGAAGCTTGGGATCAGATGCGCAGAGTAACGGGCAGATTCGCAGGGACTGCCGAACTATTAACTAA 543 0.4309 MGRKDSITASKVGANNNIPGPNSTVDVLVSKFENVGLTLQDMVALSGAHTIGKARCSTFSSRLQSNSISDGSYVDVEFVASLQQLCSGQGNSNRIAHLDLTTPATFDNQYYVNLLSGEGLLPSDQTLVSGNDQTRQIVETYVENPYAFFEDFKISMIRMGSLGSDAQSNGQIRRDCRTIN* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0513 180 PANTHER PEROXIDASE 72-RELATED 1 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g0513 180 PANTHER PEROXIDASE 40 1 179 - -
Psa4g0513 180 Pfam Peroxidase 1 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g0513 180 ProSitePatterns Peroxidases proximal heme-ligand signature. 41 51 IPR019793 -
Psa4g0513 180 Gene3D - 1 180 - -
Psa4g0513 180 Gene3D Peroxidase, domain 2 19 159 - -
Psa4g0513 180 ProSiteProfiles Plant heme peroxidase family profile. 1 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g0513 180 SUPERFAMILY Heme-dependent peroxidases 1 180 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa4g0513 180 PRINTS Haem peroxidase superfamily signature 41 56 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g0513 180 PRINTS Haem peroxidase superfamily signature 99 114 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g0513 180 PRINTS Plant peroxidase signature 40 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g0513 180 PRINTS Plant peroxidase signature 97 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g0513 180 PRINTS Plant peroxidase signature 113 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g0513 180 PRINTS Plant peroxidase signature 154 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0513 Psa-Chr4 31999853 32000639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0513 1 180 Peroxidase AT4G16270 58.242 5.76e-66 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0513 K00430 - gmx:100787637 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0513 4 31999853 32000639 Psa4g0513 4 31999853 32000639 ECH