Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0482 ATGGATCTTTACCGGCTTACCACTTCCATCGCGATACGGTTCAGGATCAAACAGTTGGTTGATACATCTAGAGGGAGGAGGCTGGTGTGGAACTCAAAGCCGAGGAAATCCGATTTTTACAATTGGAATCGAGTAAAAGTTCGTTATTGTGACGGGGCATCGTTTAGCGGAGACAGTCAAAATGAGGCAGCAGGGTTGTATTTCAGAGGGCAGCGCATTTGGCAGGCTGCAATGGAAGATTTAATGTCGAAAGGAATGCGATATGCCAAACAGGCTCTTCTATCGGGATGTTCTGCGGGAGGTTTATCAGCTATACTACATTGCGATGAGTTCCGGGAATTGTTTCCAAGAACCACTAGAGTAAAGTGCTTTAGCGATGGTGGATTATTCCTTGACTCCGTTGACGTATCTGGCCGTCGTAGTTTAAGGAATTTGTTTGGAAGTGTAGTCAACTTACATGGTGTGCATAATAGCCTTCCGAGGAGTTGCACCAGTCGCCTCAATCCAATTTTGTGCTTTTTCCCGCAGCGTTTAATCGCGAGTGTTAGGACCCCGCTATTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCTAGTCTAGCTCCACCGTCTGCTGACTATCGTTGGAATTGGTTTGAATGCAGAAAAAACTACGCACGCTGCAGTTGGCCACAGATACAATTTCTACAAGGTTTTCGAAACCAGATGCTTAGAGTTACAAGACGATTCTCATGGTCGCGCCAAAACGGATTATTCATTAATTCGTGTTTTGCTCACTGTCAATCCGAAAGACAGGATACATGGTTTGCTCGCGGTTCTCCTCATATTGGAAATAAAGGTATCGCGGATTCTGTCGGGAACTGGTTTTTCGACCGAGTCGGTGTTCAAGCCATAGGCTGTGCTTACCCTTGTGACAAAACCTGTCATAATTTGGTTTTCAACTAA 951 0.4511 MDLYRLTTSIAIRFRIKQLVDTSRGRRLVWNSKPRKSDFYNWNRVKVRYCDGASFSGDSQNEAAGLYFRGQRIWQAAMEDLMSKGMRYAKQALLSGCSAGGLSAILHCDEFRELFPRTTRVKCFSDGGLFLDSVDVSGRRSLRNLFGSVVNLHGVHNSLPRSCTSRLNPILCFFPQRLIASVRTPLFLLNAAYDTWQIQASLAPPSADYRWNWFECRKNYARCSWPQIQFLQGFRNQMLRVTRRFSWSRQNGLFINSCFAHCQSERQDTWFARGSPHIGNKGIADSVGNWFFDRVGVQAIGCAYPCDKTCHNLVFN* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0482 316 PANTHER PECTIN ACETYLESTERASE 35 315 - -
Psa4g0482 316 PANTHER NOTUM-RELATED 35 315 IPR004963 GO:0016787
Psa4g0482 316 Pfam Pectinacetylesterase 31 294 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0482 Psa-Chr4 29286743 29289052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0482 28 315 Carbohydrate Esterase AT5G26670 65.625 1.72e-142 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0482 K19882 - gmx:100791571 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0482 4 29286743 29289052 Psa4g0482 4 29286743 29289052 ECH