Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0477 ATGGCAACGTCTAATGTGACATGTCCTGCGCCTATGAAGGCCGTGTCTAATGGCGCATTCCAACACGAAAATCCACTTGATTTTGCAGTTCCTCTTATCATCCTTCAGATATGTGTGGTTGTTACATTCACTAGGTTTATTGCATTCCTTTGCAAACCCCTCAAACAACCTCGTGTCATCGCAGAAATCATAGGAGGAATATTACTCGGCCCGTCTGCGATTGGGCGAAGCCAGAAATTCTTAGACACAGTTTTTCCTAAGAGAAGCTTAACAGTCCTAGACACACTAGCAAACATTGGTCTTTTGTTCTTCTTATTCCTAGTTGGTCTTGAGCTCGACATGCGTTCAATCAAGAAAACAGGTCACAAAGCCTTAGGAATCGCGCTATGTGGAATCACGGTTCCGTTTGTGCTTGGCATTGGAACGTCCTTTGTTCTTAGAGCTACAATCTCCAAAGGTGCAGAGGCTGTCCCTTTTCTTGTCTTCATGGGTGTTGCTCTCTCGATTACTGCATTTCCTGTCCTCGCTCGAATCCTAGCTGAGCTCAAACTCCTGACAACTGACGTCGGTCGTATAGCAATGTCAGCGGCTGCTGTCAATGATGTTGCAGCTTGGATACTTCTTGCTCTTGCCATAGCTTTATCAGGTGACGACACGTCCCCGTTGATTTCTCTTTGGGTTATGCTCACCGGTGCTGCTTTTATTCTCTTTGCTGTTTTCGCTATAAGACCGTTGCTTGCGTACATGGCGAAGCGTTCCCCCGAGGGTGAGCCTGTGAAGGAGCTTTACATTTGTATCACATTGACATTGGTTTTGGCTTGTAGTTTTGTTACTGATACTATTGGAATTCATGCACTATTTGGTGCTTTTGTTGTTGGTATTATTATGCCGAAAGACGGTCCTTTTGCCGGTGTTTTGATCGAGAAAATCGAAGATCTTGTGTCTGGAATTTTCTTGCCACTTTATTTTGCTTCTAGTGGTTTGAAAACAAATGTGGCAACCATTAAAGGAGGGGTTTCTTGGGCACTATTAGCACTTGTTATATTCAATGCTTGCTTTGGAAAAATCGTTGGTACAGTTGTAGTATCATTAATATTCAAGGTGCCTTTTAGAGAATCACTTGCACTTGGATTTCTCATGAACACCAAAGGATTGGTAGAGCTCATTGTTCTCAACATCGGAAAGGATCGCAAGGTACTAAATGACCAAGCATTTGCAATTTGTGTTCTTATGGCATTATTCACAACCTTCATCACCACCCCAATAGTGATGGCAGTGTATAAACCAGCTAGAAGAGGTGCACCTTACAAGCACAAAACAGTTCAACGCAAAGATCGTGAATCGGAGCTCAGAGTGTTGGCGTGTTTCCACAGCACACGCAACATCCCTACACTAATCAACCTTGTAGAATCCTCCCGAGGAACCCGAAAGCGCGGAAGACTTTGTATCTACGCAATGCACTTGATGGAACTCTCAGAGAGATCTTCAGCTATTTCCATGGTTCACAAGGCGCGTAACGATGGCATGCCGTTTTGGAATAGAAAAGAGAATGATAAAGATCAAATGGTTATCGCTTTCCAAACATACGGAAAATTGAGCAGTGTCAACGTCCGTCCCATGACAGCAATCTCAGCTCTCACCAACATTCACGAAGATATTTGTACTAGCGCCCATCAAAAGCAAGCCGCTATAATAATCCTTCCGTTCCATAAACACCAACGTGTCGACGGAACAATGGAATCATTAGGACATTCATTTCATGTAATCAATCAGCTTGTATTGAGTCATGCACCGTGTTCTGTTGGAATTCTTGTCGATCGCGGTCTTGGAGGAACAAGCCAGGTTCAAGCTAGTGATGTTTCATTCAATGTTGTCGTTGTATTCTTTGGAGGACGCGACGATAACGAAGCACTTGCTTACGGTATGAGAATAGCAGAACATCCCGGGATTGTGCTAACTGTTGTTAAATTTGTGTCTCCACCTGGAATGACACTATCATTCGGCGCTAAGTTAGTCGGTGTTGCATCGGATAAGAGCAGGACAGTAGTGATTAATGATAGTGAAGGTAGTAGCCATGATGGTAACAAAAACCAAGATGAACAACATTGGAGTGAGTTTGTTAATGCAAGAAGCAAAAATGAAGAATCAGTTAAGTATGAAGAAAAGCTGGTTGAAAGTAAAAGTGATATTGAGACAGCATTGAAGGAATTAAGTAGAAGCAATTTGATATTGGTTGGTAGAATGCCACCAGTTGCACCTTTGGTTAGTACAAGTGATTGTCCTGAGCTTGGTCCTATTGGAAGCTATTTGAGTTCTTCTAGTTTCTCCAATTCTGCATCAGTGTTGGTTATTCAACAATACAATCCTTCAACTGATATTCATCCTTTGGTTATGGAGGAATTTGATTGTCCAGAAGTGCCAGACTCACCAAGGAGTTAG 2439 0.4276 MATSNVTCPAPMKAVSNGAFQHENPLDFAVPLIILQICVVVTFTRFIAFLCKPLKQPRVIAEIIGGILLGPSAIGRSQKFLDTVFPKRSLTVLDTLANIGLLFFLFLVGLELDMRSIKKTGHKALGIALCGITVPFVLGIGTSFVLRATISKGAEAVPFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGDDTSPLISLWVMLTGAAFILFAVFAIRPLLAYMAKRSPEGEPVKELYICITLTLVLACSFVTDTIGIHALFGAFVVGIIMPKDGPFAGVLIEKIEDLVSGIFLPLYFASSGLKTNVATIKGGVSWALLALVIFNACFGKIVGTVVVSLIFKVPFRESLALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHKTVQRKDRESELRVLACFHSTRNIPTLINLVESSRGTRKRGRLCIYAMHLMELSERSSAISMVHKARNDGMPFWNRKENDKDQMVIAFQTYGKLSSVNVRPMTAISALTNIHEDICTSAHQKQAAIIILPFHKHQRVDGTMESLGHSFHVINQLVLSHAPCSVGILVDRGLGGTSQVQASDVSFNVVVVFFGGRDDNEALAYGMRIAEHPGIVLTVVKFVSPPGMTLSFGAKLVGVASDKSRTVVINDSEGSSHDGNKNQDEQHWSEFVNARSKNEESVKYEEKLVESKSDIETALKELSRSNLILVGRMPPVAPLVSTSDCPELGPIGSYLSSSSFSNSASVLVIQQYNPSTDIHPLVMEEFDCPEVPDSPRS* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0477 812 Pfam Sodium/hydrogen exchanger family 39 422 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Psa4g0477 812 Gene3D - 32 434 IPR038770 -
Psa4g0477 812 PANTHER CATION/H + ANTIPORTER 1 809 - -
Psa4g0477 812 PANTHER CATION/H+ EXCHANGER 3 1 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0477 Psa-Chr4 28960563 28964770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0477 1 802 Antiporter Super Family AT3G17630 70.471 0.0 1129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0477 - - gmx:100780382 1283.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0477 4 28960563 28964770 Psa4g0477 4 28960563 28964770 ECH