Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0473 ATGTGTGTATATGATGGAATTCCTAGAGAAAAGGTTGAAGAAATATTGATGATGGCTGCTGCCACTGCCAAGTCTTCTGAAATGAAAAATGGAATTCCATTCACTTCACTGTTGACCAGTTTTGCCACACCTTCTTCTCCACAAGGAACTTCTAACAATGTGCCTTCTCCTCCATCAGTCTGTTTTCCTGCTGCTGACAAGAGTTCCATTTGCAGGATGCAAGAATTTCCATTAGCACGCAGACAGTCACTTCAAAGTTTTCTTGAGAAGAGAAGGATGAGGGTACGTGGCAAAGTACCTTATACATCTTCATCATCAAAAGGAACTAACAACATTGACAACAACTTCAACACAGCATTGGTTCCTTCCACTTGA 375 0.4107 MCVYDGIPREKVEEILMMAAATAKSSEMKNGIPFTSLLTSFATPSSPQGTSNNVPSPPSVCFPAADKSSICRMQEFPLARRQSLQSFLEKRRMRVRGKVPYTSSSSKGTNNIDNNFNTALVPST* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0473 124 MobiDBLite consensus disorder prediction 99 124 - -
Psa4g0473 124 ProSiteProfiles Tify domain profile. 1 21 IPR010399 -
Psa4g0473 124 Pfam Jas motif 77 101 IPR018467 -
Psa4g0473 124 PANTHER DIVERGENT CCT MOTIF PROTEIN 1 116 - -
Psa4g0473 124 MobiDBLite consensus disorder prediction 98 124 - -
Psa4g0473 124 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 116 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0473 Psa-Chr4 28885806 28888052 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0473 1 110 Tify Gene Family AT5G20900 42.373 1.26e-15 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Psa4g0473 Jas_motif 4.7e-07 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0473 - K13464 gmx:100306655 118.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0473 4 28885806 28888052 Psa1g0381 1 24117263 24119722 PCT