Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0471 ATGACCCAACAATCCATCTCCAATTTCACCCTAACCCAATCCCTATACGAAGCAGCTCTAATCCTCGCACTTCTAAGATGGATCCTCTGTTTCCTTTTCAAAACGATCAAAAACCGAAACACATCCCAACACCAACAACATTGTTGTCAAATGTTACCATTAACCAGCTTCGGAGAAATCATAGAAAGACATCCGGAAACACAGGACTCTTCTACCACATGTGCCGTTTGTTTGAACAAGATGAAAATGGAAGACGAGGTTAGAGAATTGATGAACTGTTGTCATGTGTTTCATAGAGAATGTATTGATAAATGGTTGGAACATGGTCATGAGAATGAGAATCATAATCAAACTTGTCCACTTTGTAGGGCTCCTTTGATTAGTACTGATGCGGTTTCTTCCGGAGTTTTGAGTGATTGTGTTTCTCCTAATCAACCTAGTTGGGCTGTCGAGAGACTTCTTTATCTGTTCGGTGATGATCTTTTGTCTTGTTGA 495 0.402 MTQQSISNFTLTQSLYEAALILALLRWILCFLFKTIKNRNTSQHQQHCCQMLPLTSFGEIIERHPETQDSSTTCAVCLNKMKMEDEVRELMNCCHVFHRECIDKWLEHGHENENHNQTCPLCRAPLISTDAVSSGVLSDCVSPNQPSWAVERLLYLFGDDLLSC* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0471 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 137 IPR013083 -
Psa4g0471 164 SUPERFAMILY RING/U-box 64 128 - -
Psa4g0471 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 8 162 - -
Psa4g0471 164 Pfam Ring finger domain 73 123 IPR001841 -
Psa4g0471 164 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 8 162 - -
Psa4g0471 164 SMART ring_2 74 122 IPR001841 -
Psa4g0471 164 ProSiteProfiles Zinc finger RING-type profile. 74 123 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0471 7 161 C3H Transcription Factor Family AT5G20885 43.023 1.37e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0471 K16281 - mtr:MTR_4g124390 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0471 4 28827967 28829749 Psa4g0471 4 28827967 28829749 ECH