Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0448 ATGAGATTAGTGAATCAATTGTTTCAGAGTTCAGTAGCTACTGGTGGAGCAGCTGCTCCTACACAGTTGTTAGTTCTGTGGCCTTCTCATTCAGTTCCATTGAGTGTGTTGGGTTCGCCCAAGAATATGCCTTCGCTAGAGGTGCAGATGTCGACGAGATGCAGCTTTTGGGTTGACACTTTCAGAGAGTCTGGGAGCTTATCTTGGTATTATGGATCCGAAGAGAATTTGTTACTGCAGTATGGAAGACTGGCCTTGAAGGGGTCTGTTGATCCTTATGGTGGTCCTCCAAATCAGTGGCAACATAATTCTCACCCTCCTTCAGATCATGTAGCCTCAATGAAGCCACCACAACCTCCTGCTCCAATTCCATCACGACCTCCTTCTCATGTTGCTCCGCCACTGCCTCCTCTCATGAGCAGCAGTGGTGGTACCGGCTCAAACTATTCAGGCGGCGAACTACTTCCACCTCCTTCTCCAGGCCTTGCATTTAGCACTGCGAAGAGTACGTTTACATACAAGGAGTTGGCGCGCGCAACGGATGGCTTCTCTGATGCTAACCTCCTTGGACAAGGTGGATTTGGATATGTTCATAGAGGTATTCTCCCTAATGGTAAAGAGGTTGCTGTTAAGCAGCTGAAAGCTGGTGGAAGTGGACAAGGAGAAACCACCGGGTTTCAGAGGCTACTTGTTTATGAGTTTGTTCCCAACAATACATTGGAATTTCATTTACATGGAATGGACGACCAACGATGGATTGGCAACAAGATTGCGAATTGCTTTAGGCATCTGCAAAAGGACTTGCTTATCTTCATGAAGATTGTATGCTCTGTACTTGATCGTATTTTTCTCAGCAAAGCTAGTTTTTGTCAAACTCAATGTTTATTGTAA 891 0.4579 MRLVNQLFQSSVATGGAAAPTQLLVLWPSHSVPLSVLGSPKNMPSLEVQMSTRCSFWVDTFRESGSLSWYYGSEENLLLQYGRLALKGSVDPYGGPPNQWQHNSHPPSDHVASMKPPQPPAPIPSRPPSHVAPPLPPLMSSSGGTGSNYSGGELLPPPSPGLAFSTAKSTFTYKELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGGSGQGETTGFQRLLVYEFVPNNTLEFHLHGMDDQRWIGNKIANCFRHLQKDLLIFMKIVCSVLDRIFLSKASFCQTQCLL* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0448 296 MobiDBLite consensus disorder prediction 102 129 - -
Psa4g0448 296 ProSitePatterns Protein kinases ATP-binding region signature. 189 211 IPR017441 GO:0005524
Psa4g0448 296 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 89 222 - -
Psa4g0448 296 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 224 247 - -
Psa4g0448 296 MobiDBLite consensus disorder prediction 112 129 - -
Psa4g0448 296 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 224 247 - -
Psa4g0448 296 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 89 222 - -
Psa4g0448 296 SUPERFAMILY Protein kinase-like (PK-like) 162 252 IPR011009 -
Psa4g0448 296 Gene3D Phosphorylase Kinase; domain 1 159 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0448 Psa-Chr4 27043473 27045894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0448 133 245 Trihelix Transcription Factor Family AT4G32710 46.429 1.81e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0448 - - gmx:100781944 202.216