Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0439 ATGGCCGTTGTTCGCTTCCTTATCTTCATCCTTCTCATCTTCCTCTCTCTCCCTTCCCAATGCATTTCCATTACCGAATCTGAAGCTCTCCTCAAACTCAAACAATCATTCACAAACTCACAATCTCTTTCTTCATGGGTCCCCAATCAAAATCCATGCTCTTCAAAATGGGTTGGTGTAATTTGTTTCAACAACATCGTCTCGAGTCTTCATCTCTCTAATTTAGGCCTTTCGGGTAAAATTGACATTGATTCTTTATTACAGATTCCATCCATAAGAACCATAAGTTTCGCTAACAACTCTTTCGATGGTCCTATTCCCGAATTCAATAAACTCGGTGCTCTTAAAGCTCTTTATTTAGCACAGAACCAATTCTCAGGACCAATTCCTCCACAATATTTTTCACATTTAGCTTCTTTGAAAAAAGCATGGCTCAACAACAACAAGTTCTCAGGAAATATACCAGAATCATTAGCAAGCCTTCGTTTCCTCGGCGAGTTACATCTCGAAAACAACGAGTTCTCTGGTCCTATCATAGAATTAAAACAAGATATCAAATCATTTGACATATCCAACAATAAGTTACAAGGCCCAATACCAACTACAATGTCGAGGTTCGAAGCAAAATCTTTTGCAGGAAATGGAGAGCTTTGTGGGAAGCCTCTTGATAAAGAATGTGATCCTGCTCCAATTTCAATTCCAACAACACCCGACAGTGGACAAGGTTCTGGATGGGCTTTAAAGGTTATTGCCATTCTAATTGTTGCAACGGTTGTGGCCGTGTTTTTCACGTTAATTAAATCGAAACAACGTAGAGTGGACGATGATTTCAGTGTTATGAGTAGAGAAAATAATGATGATGTGGTTCAGGTTCATATTCCTAGCTCAAACTATAGTAGAGCATCAGAAGTTAGTAAAAAAGAATCTAGGAGAGGTGCTTCAAAGAGTGGTGGAATGGGTGATCTTATAATGGTGAATGATGAAAAAGGTGTGTTTGGTTTACCTGATTTGATGAAAGCTGCTGCTGAGGTTTTAGGAAACGGTGGGTTAGGTTCTGCTTATAAAGCTGCAATGACTAATGGCTTATCTGTAGTTGTCAAGAGGATGAGAGAGATGAATAAAGTTAGTAGAGATATATTTGATGCTGAGATGAGACGGTTTGGGAGACTCAGAAACCGTAATATTTTGGCTCCTTTGGCTTACCATTACCGCCGAGAGGAGAAGTTATTTGTTACCGAATATATGCCCAAAGGAAGCTTGTTATACGTCTTGCATGGTGATAGAGGATCAAGCCATGCTGAATTGAATTGGCCAACACGTTTGAAGATTGTGAAGGGAATTGCACGTGGTTTAACCTTTCTCTACACAGAATTTGCATCCGGAGACCTTCCACATGGAAATCTTAAATCAAGCAATATACTTCTAACTGATAATTACGAGCCGCTTTTAAGTGACTTTGCATTTCATCCACTGATCAACCCAACCTATGCAGCACAAACAATGTTTGCATACAAGACTCCTGATTACATGGTCTACCAACACGTTTCACAGAAAACCGACGTTTATTGTCTCGGAATCATCATTCTTGAAATCATTACTGGAAAATTCCCTTCTCAATATCACAGTAATGGTAAAGGTGGCACCGATGTAGTTCAATGGGTTTTCACAGCAATTTCTGAGAGAAGAGAAGCTGAACTTATTGATCCAGAGTTAGCAGGAAACGAGACGGACTCCATCAATCAAATGCTACAACTTGTTCAAATCGGGGCTGCTTGCACAGAAAGTAACCCTGAACAACGACTTAACATGAAGGAAGCTATTAGAAGGATAGAGGAATTACAAGTTTAA 1848 0.3956 MAVVRFLIFILLIFLSLPSQCISITESEALLKLKQSFTNSQSLSSWVPNQNPCSSKWVGVICFNNIVSSLHLSNLGLSGKIDIDSLLQIPSIRTISFANNSFDGPIPEFNKLGALKALYLAQNQFSGPIPPQYFSHLASLKKAWLNNNKFSGNIPESLASLRFLGELHLENNEFSGPIIELKQDIKSFDISNNKLQGPIPTTMSRFEAKSFAGNGELCGKPLDKECDPAPISIPTTPDSGQGSGWALKVIAILIVATVVAVFFTLIKSKQRRVDDDFSVMSRENNDDVVQVHIPSSNYSRASEVSKKESRRGASKSGGMGDLIMVNDEKGVFGLPDLMKAAAEVLGNGGLGSAYKAAMTNGLSVVVKRMREMNKVSRDIFDAEMRRFGRLRNRNILAPLAYHYRREEKLFVTEYMPKGSLLYVLHGDRGSSHAELNWPTRLKIVKGIARGLTFLYTEFASGDLPHGNLKSSNILLTDNYEPLLSDFAFHPLINPTYAAQTMFAYKTPDYMVYQHVSQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVFTAISERREAELIDPELAGNETDSINQMLQLVQIGAACTESNPEQRLNMKEAIRRIEELQV* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0439 615 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Psa4g0439 615 Pfam Protein kinase domain 343 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0439 615 Gene3D Ribonuclease Inhibitor 185 223 IPR032675 -
Psa4g0439 615 PANTHER LRR RECEPTOR-LIKE KINASE 7 615 - -
Psa4g0439 615 Gene3D Ribonuclease Inhibitor 21 180 IPR032675 -
Psa4g0439 615 Gene3D Phosphorylase Kinase; domain 1 345 415 - -
Psa4g0439 615 Gene3D Transferase(Phosphotransferase) domain 1 416 615 - -
Psa4g0439 615 SUPERFAMILY Protein kinase-like (PK-like) 343 610 IPR011009 -
Psa4g0439 615 SUPERFAMILY L domain-like 24 205 - -
Psa4g0439 615 ProSiteProfiles Protein kinase domain profile. 339 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0439 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0439 Psa-Chr4 26761150 26763968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0439 1 615 Receptor kinase-like Gene Family AT3G42880 50.704 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa4g0439 Pkinase 9.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0439 - - gmx:100788667 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0439 4 26761150 26763968 Psa4g0439 4 26761150 26763968 ECH
Psa4g0439 4 26761150 26763968 Psa1g3163 1 277831052 277833099 PCT