Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0427 ATGAAAATGCATATCTCCATTACAGTTCTTGTTAGTTTCTTGCTCTTGATCATGTCACCAGCGTTTCTTTCATTCTCGACCGCCGCCGCAACAACACCGCAAGATCTCCTCCGTTCATCATGTGCCCAAGCAAGATACCCAGCTCTCTGCGTTCAAACTCTCTCCAACCAAGTCAGTCCCACAGCGAAGCCCTTAGAGTTAGCTCAGGTCGCCGTTAAAGCCAGTCTCGCTCGCACTCTCACGCTTTCTGTCTACCTCAAGAATATTCTAAACACAGAGGTGCCCGTTGGTTCCAAAACCAACAACAGAAAGCGAGTTGCATTGAGTGACTGTGTTGCTCAGATTTCCGATTCCGTTCTTGAGTTAAACCGGACGTTGAACGAGTTACGGAAGCTTCACATGGGAACGTTCGAGTGGCAAATGAGTAACGCTCAGACATGGGCTAGTACCGCTTTAACCAACGGGAACGCCTGTATTAACGGTTTGAATAGGAGTGACGCAGAAGAGAAGATGAAGGTGGAGGTGAAACGTAAGGTTACGGAAGTATCCATGTTTACAAGTAACGCTCTCTACTTAATCATTCGTCTCGGTGATAGCAGGAATCCAAAGCCTCACTCCAATTCCAATAACTGA 633 0.4708 MKMHISITVLVSFLLLIMSPAFLSFSTAAATTPQDLLRSSCAQARYPALCVQTLSNQVSPTAKPLELAQVAVKASLARTLTLSVYLKNILNTEVPVGSKTNNRKRVALSDCVAQISDSVLELNRTLNELRKLHMGTFEWQMSNAQTWASTALTNGNACINGLNRSDAEEKMKVEVKRKVTEVSMFTSNALYLIIRLGDSRNPKPHSNSNN* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0427 210 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 5 205 - -
Psa4g0427 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 193 IPR035513 -
Psa4g0427 210 TIGRFAM PME_inhib: pectinesterase inhibitor domain 3 194 IPR006501 GO:0004857
Psa4g0427 210 SMART PMEI_2 32 192 IPR006501 GO:0004857
Psa4g0427 210 Coils Coil 112 132 - -
Psa4g0427 210 CDD PMEI-like_3 39 196 - -
Psa4g0427 210 Pfam Plant invertase/pectin methylesterase inhibitor 36 191 IPR006501 GO:0004857
Psa4g0427 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 196 IPR035513 -
Psa4g0427 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0427 Psa-Chr4 26239977 26241228 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0427 36 199 Carbohydrate Esterase AT3G14310 26.471 1.06e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0427 - - mtr:MTR_4g124855 276.559