Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0384 ATGGAGGAAATTGCAGTACCGTTTAAGCTTGGAAATTTGATTCAGAAAGATGCTGCGGTTACGACTCACATGGAGATAACCGGGTTAAAGCTTATGGCGAATACTGCGGCAGCTTTGATGTTAAATCCTGCAGCTGGAAATGAAAACCGTGCCGATGTTAGTCTTCAACGGAAAATGATGGTATCTGCAGAGGTAAAGGAGAATCAAGTTGGAGTTGTTTCGGAAATGGTGATTGAGTGTGAGAGTAATTGGGTTTTGAGTGAAAGCGGTAAGCAGACAAATAAGGAAGATGGAATTATGTTAGCTGTGGATTTTCAGTGTTTGCATGATTCGGGCTCTCAATCTGGGGCCGATTTGCCAATAATTGTGACGGTTGGTGATGATATTCATGGTAAGTTTAGTAGTATAAACGAGGTGCTTCCGGGAGTAAAGCCAGAGCAGAATACGGTTTCTATTGCAATGGATGTTGAGAGTGAAAATCGATATGCATCAGAAGAGTCTGATCCAAAGCTATCTGCTATAATTCTTGATCAGTCGCCTGTGGAGAACAAAATGTCGAGAGCAAGCAACCAGAATGGGTTAGAATCGAGTAATGATCCTCTTTGGGGTTTCTCGTCAATCTGTGGGAATAGACCGGAGATGGAAGATGCTATTGCTGTTAAACCTCAACTTTTTCAAGTCCCTTCGCGGATGCTTATGGATGATGAACACGTAAATGAAAACTCAAAATACTCGTCAGCCCATTTTTTCAGTGTCTATGATGGACACGGGGGCTTTCAGGTTGCTAATTACTGTCGGGAACGTCTTCATTCAGTGTTGATTGAGGTGATTGAAGCTCAACAATCGAGTTTGGCAGAAACAAATGGGAGAAATGATTGGCAGGAAGATTGGAAGAAAGTATTGATCAACTGTTTTCAGAAAGTAGATGACGAGGTAGGAGGAATTGGTGCAGGTAGTAGCGGAAGTAACAGCGGTGGATCTGAGTCCAACATTGAACCTATTGCTCCTGAGACTGCTGGTTCCACTGCAGTGGTTGCCATTTTAAGTCAAACCCACATAATAGTTGCAAACTGCGGGGATTCAAGAGCTGTCTTGTATCGCGGGAAAGAAGCTATGGCTTTGTCTGCTGACCACAAACCGAATCGAGAGGATGAAAGAGCAAGAATAGAAGCTGCAGGAGGAAGAGTCATACATTGGAAAGGATACCGAGTTCTTGGTGTCTTGGCGATGTCAAGGTCCATAGGTGATAGATACTTGAAACCATGGATAATTCCAGAGCCAGAAGTTAATATTATGCAGAGAGAAAAAAACGATGAATGTCTAATTATAGCAAGCGATGGTTTATGGGATGTAATAACAAATGAAGAAGCATGTGAAGTTGCAAGGAAGCGAATCCTTCTTTGGCACAAGAAATATGGCGACAACGGAACAACAGTATATGACAAAGGAGAAGGAGGAGTTGATCTTGCATCTCAATCTGCTGCAGAGTATCTATCTAAACTCGCCCTCCACAGAGGAAGCGGCGATAACATCTCTGTAATTGTGATAGATTTAAAGGCTGTGAGAAAATTGAAGAGAAAGACATAA 1587 0.4247 MEEIAVPFKLGNLIQKDAAVTTHMEITGLKLMANTAAALMLNPAAGNENRADVSLQRKMMVSAEVKENQVGVVSEMVIECESNWVLSESGKQTNKEDGIMLAVDFQCLHDSGSQSGADLPIIVTVGDDIHGKFSSINEVLPGVKPEQNTVSIAMDVESENRYASEESDPKLSAIILDQSPVENKMSRASNQNGLESSNDPLWGFSSICGNRPEMEDAIAVKPQLFQVPSRMLMDDEHVNENSKYSSAHFFSVYDGHGGFQVANYCRERLHSVLIEVIEAQQSSLAETNGRNDWQEDWKKVLINCFQKVDDEVGGIGAGSSGSNSGGSESNIEPIAPETAGSTAVVAILSQTHIIVANCGDSRAVLYRGKEAMALSADHKPNREDERARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIMQREKNDECLIIASDGLWDVITNEEACEVARKRILLWHKKYGDNGTTVYDKGEGGVDLASQSAAEYLSKLALHRGSGDNISVIVIDLKAVRKLKRKT* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0384 528 ProSiteProfiles PPM-type phosphatase domain profile. 201 518 IPR001932 -
Psa4g0384 528 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 100 528 - -
Psa4g0384 528 CDD PP2Cc 203 518 IPR001932 -
Psa4g0384 528 Pfam Protein phosphatase 2C 227 511 IPR001932 -
Psa4g0384 528 ProSitePatterns PPM-type phosphatase domain signature. 249 257 IPR000222 GO:0043169
Psa4g0384 528 PANTHER ALPHABET, ISOFORM E-RELATED 100 528 - -
Psa4g0384 528 Gene3D - 189 528 IPR036457 -
Psa4g0384 528 SUPERFAMILY PP2C-like 200 519 IPR036457 -
Psa4g0384 528 SMART PP2C_4 191 516 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0384 Psa-Chr4 23129694 23131608 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0384 182 527 PP2C-type Phosphatase Gene Family AT4G26080 56.857 2.61e-131 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0384 K14497 - gmx:100789207 706.442