Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0383 ATGAACAGAGGAAATTTTGGTCTCGGTCTCAAACTATCTGTTCCTGCAACTGATCAAGTTGCTTTTGCCAAGTTTCTGACTGAAAGTGGAACGTTTAAGGATGGAGATCTGCTTGTTAACAGAGATGGAGTTCGAATTGTCTCTCAGTCTGAAGTTGAAGCTCCACCACCAATCAAGGCAACAGACAACCAGTTAAGTTTGGCGGACATCGACATAGTGAAAGTTGTTGGGAAGGGAAATGGAGGGGTGGTGCAATTGGTGCAACACAAATGGACTAATCAGTTTTTTGCATTAAAGACAATTCAAATGAATATTGAAGAGTCCGTGCGCAAGCAGATAGCTAAAGAGCTGAAAATTAATCAAGCAGCACAATGTCCTTATGTTGTTGTCTGCTACCAATCATTCTATGATAATGGTGTCATATCAATCATCTTAGAGTACATGGATGGAGGTTCCTTGGCTGATCTTCTGAAGAAAGTTAAAACAATTCCAGAGCCTCGTCTTTCTGCCATCTGCAAGCAGGTTCTAAAGGGTTTAGCATATCTTCACCACGAAAGACATATTATCCACAGAGACTTGAAGCCTTCTAATTTGTTGATAAACCATACAGGCGAAGTAAAGATTACTGATTTTGGTGTTAGTGCAATTATGGAAACTACATCTGGTCAAGCAAATACTTTCATTGGCACGTACAACTATATGTCTCCAGAGAGAATCAATGGAGGCCAGGGGGGCTACAACTACAAAAGTGATATATGGAGTTTGGGACTAATATTGCTCGAGTGTGCTATGGGGCGGTTTCCATATATGCCACCAGATCAAAGTGAAAGATGGGAAAGTATATTTGAGCTTATTGAAACTATTGTCGACAAGCCTCCTCCTAGTGCTCCATCTGAACAATTTTCTCCCGAATTTTGCTCATTTATCTCTGCATGTCTACAGAAAGATCCGGGGAATAGACTGTCGGCTCAGGAACTTTTGGAACTTCCTTTTATCAGCATGTATGATGACCAGCATGTAGATCTCTCGGCTTACTTCTCCAAAGCAGGATCTCCACTCGCTACCTTATAA 1071 0.4127 MNRGNFGLGLKLSVPATDQVAFAKFLTESGTFKDGDLLVNRDGVRIVSQSEVEAPPPIKATDNQLSLADIDIVKVVGKGNGGVVQLVQHKWTNQFFALKTIQMNIEESVRKQIAKELKINQAAQCPYVVVCYQSFYDNGVISIILEYMDGGSLADLLKKVKTIPEPRLSAICKQVLKGLAYLHHERHIIHRDLKPSNLLINHTGEVKITDFGVSAIMETTSGQANTFIGTYNYMSPERINGGQGGYNYKSDIWSLGLILLECAMGRFPYMPPDQSERWESIFELIETIVDKPPPSAPSEQFSPEFCSFISACLQKDPGNRLSAQELLELPFISMYDDQHVDLSAYFSKAGSPLATL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0383 356 CDD PKc_MAPKK_plant_like 85 336 - -
Psa4g0383 356 PANTHER MAP KINASE KINASE 1 356 - -
Psa4g0383 356 Gene3D Transferase(Phosphotransferase) domain 1 150 352 - -
Psa4g0383 356 Pfam Protein kinase domain 73 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0383 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Psa4g0383 356 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Psa4g0383 356 SMART serkin_6 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0383 356 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 356 - -
Psa4g0383 356 ProSiteProfiles Protein kinase domain profile. 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0383 356 Gene3D Phosphorylase Kinase; domain 1 44 149 - -
Psa4g0383 356 SUPERFAMILY Protein kinase-like (PK-like) 64 340 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0383 Psa-Chr4 23125768 23129054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0383 1 327 MAP Kinase Kinase Gene Family AT4G29810 67.262 6.90e-170 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Psa4g0383 Pkinase 9.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0383 K20603 - gmx:100789734 626.32