Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0351 ATGGAAGTGGTTTTGGCACTGATGATGCAGTTGTTGAAGCTCTGCATCATCATCATCATAGGTTTTGTAGTGGCAACCCAAGGATCCAGAGGGCCATTATCACCTCCTGCATCAGCTCCAACTCCTCAAAAGAGTAAAGAAACCAAACCATTCATATCTCCAAGTTCAAGTTCTATAGCATTATCACCACAATATGAAGTTGTTCCTTCTCCAACAACACTGCAAGGAAATATGCCACCATCTGTAGCTCCTGCAGCACAAAAGGCAAGACAATTACATCATGCTCCTCAGCCATTAACTTCAGCTCACTCTCCTGCGTTGACACCTTCAGTCTCAAACTATAAACATCATCATACAAGGAACATAGGTACCATTCCTGCTCCCGCATCATCGTATATGGTTTCTCCTCCTATTTCAAGACCCCGAGATAGAGCAATTCCTCCCTCAATATCACCAACAACTGGTAGACAAAGACATCATGTTCCTCCTAGAGTATCTCCACCTGGTTCTTCTTCCAAGACACTGCCACACCCACCTCCTAATGAAGATTGTTTATCAACTGTATGCACAGAGCCTTATGTAATTTCTCCTCCTGGAGCACCTTGCAGATGTGTCTGGCCAATTCGAGTAGGTCTTCGCCTTAGCCTTTCTCTTTATACGTTCTTCCCTTTGGTCTCGGAGCTGGCTTCTGAGCTTGCCAGTGGGATTTTTATGAAGCAAAGTCAAGTTACAATTGTGGGAGCGAATGCAGCAAACCAGCAACCTGATAAAACAGTTGTCCTTATTGATTTGGTGCCACTCGGGGAAAAGTTTGATAATGCAACAGCCTTTTTGACTTCTCATAGGTTTTGGCGTAAAAAGGTTGTTATTAAAGCCTCCTACTTTGGCAACTATGATGTATTATATTTGAACTATCCAGGTTTACCTCCTTCTCCTCCTTTACCACCTTCAAGCATTACAATAATAGATGGTGGTCCTTATACCACTGGTGGCAATAATGGAGGGACAATAAAGCCCATTGGAGTTGACATACAGAAGAGGCAGAAAAGAGGTGATCTTAGCAGAGGATTTATTGCCATCATTGCTATTTCAGTTTTTGTAGCAGTTGTTTTATGCCCTGCAGCTGCCTGGTTCATGTTTAAGTTCAAAGTTCCTGTTACTCATCCGGCATCAACTCCGTGGCTTTCATATCCTTCTCTTACCAAAGCACCAGGTACTGCTGGATCATTAACTGGAGATGAAAGGGTTGATTCTGTTTCCTCGTCATTTGAATCTGGCATGGCCGCTTATAAAGCGTCTGTTAAGACTTTCAGCATGAATGACATTGAGAAAGCTACTGATAATTTTGATTCTTCAAGAATACTTGGAGAAGGTGGTTTTGGGATTGTTTTCGGAGGTGTCCTTGGAAATGGGACAAAAGTGGCAGTCAAGGTTCTAAAAAAGAGGGATGATCTTCATAGTAATCATGAATTCTTATCTGAAGTTGAGATGCTTAGTCGTCTTCACCATAGAAATCTGGTCAAGTTGATTGGTATATGTACCGAGGAAGACAGCTTCCGCTGCTTGGTTTATGAACTCGTTACAAATGCAAGCTTGGAATCACATTTACATGGGGTTGACAGAGAAAAGTGTGCACTCGATTGGCGTGCTAGGATGAAGATAGCTCTTGGTGCAGCTCGTGGTTTAGCTTATCTGCATGAAGATTCAAGTCCATCTGTTATTCATAGGGACTTCAAGTCTAGCAACATATTGTTGGAAGATGATTTTACTCCAAAAGTATCTGATTTTGGATTGGCCCGGACCGCCGTGGACGAGGAAAATAGACACATATCAACTCGTGTCGTGGGAACATTCGGCTACGTGGCTCCAGAGTACGCAATGAACGGCCATCTTCTCGTCAAGAGTGATGTATACAGCTATGGCGTCGTTCTTCTAGAGCTTCTGACAGGAAGAAAACCTATAGACATGTCACAAACTCCCGGCCAAGAGAATCTCGTTGCTTGGTCTCGTCAATTTCTCACAAGCAACAAAGGATTAGAAGCAATAATAGATCCATCTATAGGACTCGACGCGCCTTTTGATAGCGTGGCCAAAGTAGCAGCCATTGCTTCAATGTGTGTTGAGCCAGAAGTATCGAACCGTCCATTCATGAGTGAAGTTGTCCAGGCTTTAAAACTTGTATGCAGTGAATGTGAAGAAGAAGAAGCAAAAGAAGATGATGGTTCAAGAAGTTATAGCCAAGAGCTCGAGGATTTATCGGTTGTTGATAATGATATTGAAAATGGTTTGTCAGCATCAGAACTATTCAGTTCTTCTGCTAGAATTGGTAGAATGGAGTATGAAACATTTAGAAGAAAATCATATTCAGGTCCTATGGGAAATGGAAGAAGCAAACAATTGTGGCAGATAATGAGAAGGCTTTCTGGTGGTAGTGTTAGTGATCATGGAACTATATGA 2457 0.4241 MEVVLALMMQLLKLCIIIIIGFVVATQGSRGPLSPPASAPTPQKSKETKPFISPSSSSIALSPQYEVVPSPTTLQGNMPPSVAPAAQKARQLHHAPQPLTSAHSPALTPSVSNYKHHHTRNIGTIPAPASSYMVSPPISRPRDRAIPPSISPTTGRQRHHVPPRVSPPGSSSKTLPHPPPNEDCLSTVCTEPYVISPPGAPCRCVWPIRVGLRLSLSLYTFFPLVSELASELASGIFMKQSQVTIVGANAANQQPDKTVVLIDLVPLGEKFDNATAFLTSHRFWRKKVVIKASYFGNYDVLYLNYPGLPPSPPLPPSSITIIDGGPYTTGGNNGGTIKPIGVDIQKRQKRGDLSRGFIAIIAISVFVAVVLCPAAAWFMFKFKVPVTHPASTPWLSYPSLTKAPGTAGSLTGDERVDSVSSSFESGMAAYKASVKTFSMNDIEKATDNFDSSRILGEGGFGIVFGGVLGNGTKVAVKVLKKRDDLHSNHEFLSEVEMLSRLHHRNLVKLIGICTEEDSFRCLVYELVTNASLESHLHGVDREKCALDWRARMKIALGAARGLAYLHEDSSPSVIHRDFKSSNILLEDDFTPKVSDFGLARTAVDEENRHISTRVVGTFGYVAPEYAMNGHLLVKSDVYSYGVVLLELLTGRKPIDMSQTPGQENLVAWSRQFLTSNKGLEAIIDPSIGLDAPFDSVAKVAAIASMCVEPEVSNRPFMSEVVQALKLVCSECEEEEAKEDDGSRSYSQELEDLSVVDNDIENGLSASELFSSSARIGRMEYETFRRKSYSGPMGNGRSKQLWQIMRRLSGGSVSDHGTI* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0351 818 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 161 817 - -
Psa4g0351 818 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 69 161 - -
Psa4g0351 818 SUPERFAMILY Protein kinase-like (PK-like) 431 724 IPR011009 -
Psa4g0351 818 Pfam Protein tyrosine and serine/threonine kinase 452 724 IPR001245 GO:0004672|GO:0006468
Psa4g0351 818 MobiDBLite consensus disorder prediction 140 180 - -
Psa4g0351 818 MobiDBLite consensus disorder prediction 34 57 - -
Psa4g0351 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 573 585 IPR008271 GO:0004672|GO:0006468
Psa4g0351 818 CDD STKc_IRAK 468 725 - -
Psa4g0351 818 ProSitePatterns Protein kinases ATP-binding region signature. 455 477 IPR017441 GO:0005524
Psa4g0351 818 MobiDBLite consensus disorder prediction 40 57 - -
Psa4g0351 818 Gene3D Phosphorylase Kinase; domain 1 420 526 - -
Psa4g0351 818 ProSiteProfiles Protein kinase domain profile. 449 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g0351 818 Gene3D Transferase(Phosphotransferase) domain 1 527 752 - -
Psa4g0351 818 MobiDBLite consensus disorder prediction 76 105 - -
Psa4g0351 818 PANTHER OS01G0750732 PROTEIN 69 161 - -
Psa4g0351 818 PANTHER OS01G0750732 PROTEIN 161 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0351 Psa-Chr4 21187224 21191108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0351 181 817 Receptor kinase-like Gene Family AT5G56890 60.538 0.0 782
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Psa4g0351 PK_Tyr_Ser-Thr 3.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0351 - - mtr:MTR_4g126270 1087.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0351 4 21187224 21191108 Psa4g0351 4 21187224 21191108 ECH