Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0304 ATGGCTACGAATTCATCGTTTGAAGGTATTGCTCTTGATCCTTCTAAATGTAGTAAATTGAGTATGGAGGAAAAAAGAGCGCTTGTATATGAAATATCTAATGACGGTGCATCCGAGATGCTGCAGTCATGGAGCCGTCAAGAGATTTTGCAAATCCTGTGTGCTGAGATGGGAAAAGAAAGGAAGTATACTGGGCTCACAAAGTTGAAGATTATCGAAAATCTTCTGAAAATTGTTTCTGAAAAGAAATCAGGCGGCCGTGATATTGCCACAGACTCTGAACCACATTCTTTTCCTGCAACTGGTCAGAAACCTGCTAAAAGGCAGAGAAAAATTGAGAATCCATCTCGATTGCCTGTTCCTGCAAACAATGTTACAGCCAATAATGGTGATGTGAGTAATAATACAACCTACTGCAAAAACTCAGCATGCAAGGCTACCCTAAATCAAGGAGATGCATTTTGTAAAAGATGTTCATGTTGTATTTGTCATCAATATGATGACAACAAAGACCCTAGCCTATGGCTAATATGCAGCTCTGAAGCTCCATTTCCTGGTGTTTCTTGTGGCTTGTCATGTCACCTTGAGTGTGCTTTAAAACATGATGGTTCTGGAATTGGCAAAGGTGGCGAACGCACCAAACTTGATGGAGACTTCTACTGTGTCTCTTGTGGGAAAGTAAATGACTTACTCGGATGCTGGAGAAAACAACTGATGGTAGCAAAGGATGCTAGACGCGTGGACATACTCTGTTATCGTGTCTCCTTAAGCCAAAAACTTTTACAAGGGACAGAAATGTATCTAGAACTTTATAAAATTGTTGATGAAGCAGTGAAGAAACTTGAACCTGAAGTGGGTCCACTGACTGGCTCGCCATTTAAGATTGGTAGGGGGATTGTGAACAGGCTTTCTTCAGGACCTGAGGTTCAGAAACTCTGTGGTGTGGCTCTTGAATCACTTGATTCAATGCTTTCTAGAAGGATCTTGCCTCCATCACCCAATCCAACTATTCAAGATGCAAGTTTACTAGCTCCAAATATGGTGAAGTTTGAAGATGTCACTACAACATCCCTCACTGTTCTTTTATGTTTGGAAGATTCTTTGGGAGAAAATAATGCTGGTTATGCCGTGTGGCATCGTAAAGCTGATGATTTGAACTATCCATTGGACCCGACTTGCACAACTCTCCAACCAAATAGAAAGCTTGGCATCAGGGATCTACTTCCAGCTACAGAATACAGTTTGAAATTTGTTTCCAATGATTTGAGCAAGTCAGTTATGTGCGAAGTTCAAGTCTCAACAGAGCATGGTGAGGATGAAGTCCCAAATTGCTCAGCAACGGAAAGAAGTCAGAGCCCAGTAACCAACTGTAGCAGCCTTTCCAATCCATCATCTGTGGAAGATGAAACTAATCATAGCGACCAGACTGATAATCGATCAGATAATTATCCTTCTTATCACAAGGATAGTGACCAGCTCGCTTCTGGAAATCTATCAAATGATGTTATTAATTGTTCCAACTTGGGTGGAGTGGGACTTCCCACCGATACAGATTCCTTGTCCGACAAGCAAGCTGCTTTGGGAATGACAAGCACAATACCTAGTTCTGATGTACTAAAGCTTGAAAACAAGCATTCCCAAGAGGAACAAGTAACTGAGGACATGAGCACTGATGATGGTTCAGTCCCAACGGGAAGGGAATGTGTGCCGTTAGTAGGTTGCACAGAAGGGAGCTTGCCTAATACTCCCAGCAGGTTGGAAATACTTAAAGATGGTCTGGGGAAAAAAGGTAGATCCAAATTCAGTGGCAAAGATCTAGAAAAAGGATTTGGGAAAAAGGGTGGCCCTCGAGATGGAAGCAAACCCAAGAAGAAAAGTGGTGAAAGGAAAAACGAGGGTTGTGAGGCTAATGGTTTTCCAGATCGGGATTTTGAGTATTATGTGAAGGTGATTAGATGGTTAGAGTGTGAAGGACACATTGAAAAGAACTTCAGGCAGAAATTTCTGACTTGGTACAGCTTAAGAGCAACCCCTGAAGAAATAAGGATTGTGAGAATATATGTAGATACATTTCTTGAAGATCCAGCTTCTCTTGCAGAGCAACTTGTGGACACCTTCTCAGAATGCATATCAAACAAAAGATCATCAGTACCTGCAGGGTTCTGCATGAAGCTTTGGCATTGA 2184 0.4185 MATNSSFEGIALDPSKCSKLSMEEKRALVYEISNDGASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGGRDIATDSEPHSFPATGQKPAKRQRKIENPSRLPVPANNVTANNGDVSNNTTYCKNSACKATLNQGDAFCKRCSCCICHQYDDNKDPSLWLICSSEAPFPGVSCGLSCHLECALKHDGSGIGKGGERTKLDGDFYCVSCGKVNDLLGCWRKQLMVAKDARRVDILCYRVSLSQKLLQGTEMYLELYKIVDEAVKKLEPEVGPLTGSPFKIGRGIVNRLSSGPEVQKLCGVALESLDSMLSRRILPPSPNPTIQDASLLAPNMVKFEDVTTTSLTVLLCLEDSLGENNAGYAVWHRKADDLNYPLDPTCTTLQPNRKLGIRDLLPATEYSLKFVSNDLSKSVMCEVQVSTEHGEDEVPNCSATERSQSPVTNCSSLSNPSSVEDETNHSDQTDNRSDNYPSYHKDSDQLASGNLSNDVINCSNLGGVGLPTDTDSLSDKQAALGMTSTIPSSDVLKLENKHSQEEQVTEDMSTDDGSVPTGRECVPLVGCTEGSLPNTPSRLEILKDGLGKKGRSKFSGKDLEKGFGKKGGPRDGSKPKKKSGERKNEGCEANGFPDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPEEIRIVRIYVDTFLEDPASLAEQLVDTFSECISNKRSSVPAGFCMKLWH* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0304 727 MobiDBLite consensus disorder prediction 541 561 - -
Psa4g0304 727 Pfam PHD - plant homeodomain finger protein 139 258 IPR032881 -
Psa4g0304 727 MobiDBLite consensus disorder prediction 438 469 - -
Psa4g0304 727 MobiDBLite consensus disorder prediction 86 119 - -
Psa4g0304 727 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 727 IPR044514 GO:0010048|GO:0040029
Psa4g0304 727 MobiDBLite consensus disorder prediction 604 634 - -
Psa4g0304 727 MobiDBLite consensus disorder prediction 470 484 - -
Psa4g0304 727 MobiDBLite consensus disorder prediction 434 484 - -
Psa4g0304 727 CDD PHD_VIN3_plant 159 224 - -
Psa4g0304 727 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0304 Psa-Chr4 19012821 19019028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0304 4 605 PHD Gene Family AT4G30200 45.315 1.86e-150 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0304 - - gmx:100819331 1197.19