Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0295 ATGGATACTGATGAGGAATGCTCAATTGTTCTTCAGTTATCTGAAAAGGATCCTTTCTTTGATGAAAAGAAGAAACTATTACAGTGTAAAGGGTTCAGTCCCAAGGAACGGATATTTCTCCGGTGCACTCCAGAACTTCCTAGGATGAATGATATCGTAAAGATCTTACTTCAGATTGCAAGAGTCATACAGTTAAATGAGCTAGAACTCTATTTTGCTGAAGACGATGCATCAGTGGAGTTTTACAGCCCCAGGAATGAGTTGGAGGCTCTCAATTCAATTGTTTTGGTCACTGATAAATCACTTTCTAGTTGTACACATTCCCATACAAATATCCTGCAAGGGTTACGTCAAATGGTTCTTGATTTAATTTCTGATTTTTGGGAGCAAAAAAATACGAAGGAAGGAATTGAAAAGCACCACATTTGTGAGAAAGAAGAACACCTGATTGAGTGGGGTAAAAGCCATGGTGTAAAGGCACAATTAAAAATAGCCTATGTTGAAGGAGCAGGACGGGGAATGATAGGAGGGGAAGATCTAAAAGTTGGAGATATTGCTATAGAAATTCCTGTGCCCCTTATCATTTCCGAGGAGCTTGTGCTTGAAACTGATATGTATCAAGTCTTAAAAGAGGTTGATGGCATATCATCTGAGACAATATTGCTACTATGGAGTATGAAAGAGAAATACAACTGTGATTCAAAATTCAAATTATACTTTGACACACTTCCAGAAAAATTTAATACAGGATTGAGTTTCGGTATTGAGGCGATTACAATGTTAGATGGAACCTTGCTGTTTGAAGAGATAATGCAAGCAAGAGAGCATCTGCATGCTCAGTATGATGAGTTGGTTCCTGCTCTGTGCAATGGTTTTCCTGATATATTTCCTCCAGAGCTGTACACGTGGGAGAAATTTCTATGGGCCTGTGAGCTTTGGTATTCCAATAGCATGAAGATAATGTATTCAGATGGAAAGTTGAGGACATGTTTGATCCCTCTTGCTGGCTTTCTTAATCACTCACTGCACCCACATATTATGCACTATGGCAAAGTAGATCCTTCAACAAATTCATTGAAATTTTGTCTATCAAGACCATGCAGATCTGGAGTAGAATGCTGCTTAAGCTACGGGAACTTCTCTAGCTCTCATTTTATTACGTTTTACGGTTTCTTACCTCAAGGAAACAACCCGTATGATGTCATTCCTTTAGACATTGATAGTTCTGATGTTGATTCTATTGAGCATAAGCCTGTGTCCAACTGGACAACTCACATGGTGCGTGGTACTTGGCTCTCCAACAATCACAGCATATTCCATTATGGCCTTCCCTCTCCATTATTGGATCATCTTCGGAGATCTCGAAGTTCCGTGCTGCAAACAAAGACATTTTTGCAAGGAAACTTGGAAAATGAGCTGGAAGTTCTTGGAGATCTTAAAGACATCTTCGATGACATGGTGGACAATATGGGTGATATCGATCTTGATGACAGTGAAAACTACAATTGGGATGAAAAAATGGCAGTGGATTTTAAAAATCTACAAAGACGAATCGCCCGTTCTGTTTCAATTTCATGCAGTTCTGGGGTCAACATGTTGAAGAATGAACTACAGAAGTGTATGGCTGAGGACATCACAGGCTAA 1644 0.3942 MDTDEECSIVLQLSEKDPFFDEKKKLLQCKGFSPKERIFLRCTPELPRMNDIVKILLQIARVIQLNELELYFAEDDASVEFYSPRNELEALNSIVLVTDKSLSSCTHSHTNILQGLRQMVLDLISDFWEQKNTKEGIEKHHICEKEEHLIEWGKSHGVKAQLKIAYVEGAGRGMIGGEDLKVGDIAIEIPVPLIISEELVLETDMYQVLKEVDGISSETILLLWSMKEKYNCDSKFKLYFDTLPEKFNTGLSFGIEAITMLDGTLLFEEIMQAREHLHAQYDELVPALCNGFPDIFPPELYTWEKFLWACELWYSNSMKIMYSDGKLRTCLIPLAGFLNHSLHPHIMHYGKVDPSTNSLKFCLSRPCRSGVECCLSYGNFSSSHFITFYGFLPQGNNPYDVIPLDIDSSDVDSIEHKPVSNWTTHMVRGTWLSNNHSIFHYGLPSPLLDHLRRSRSSVLQTKTFLQGNLENELEVLGDLKDIFDDMVDNMGDIDLDDSENYNWDEKMAVDFKNLQRRIARSVSISCSSGVNMLKNELQKCMAEDITG* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0295 547 CDD SET_LSMT 162 392 - -
Psa4g0295 547 SUPERFAMILY SET domain 145 399 IPR046341 -
Psa4g0295 547 Pfam SET domain 171 378 IPR001214 GO:0005515
Psa4g0295 547 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 543 - -
Psa4g0295 547 Gene3D - 2 122 IPR036464 -
Psa4g0295 547 Pfam Rubisco LSMT substrate-binding 15 107 IPR015353 -
Psa4g0295 547 PANTHER BNAA07G01600D PROTEIN 3 543 - -
Psa4g0295 547 Gene3D set domain protein methyltransferase, domain 1 142 392 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Psa4g0295 SET 1.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0295 K19199 - gmx:100778605 902.894