Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0237 ATGGAGTTCAAATATCGTGCCGTGGACAGCGTCAAACCAACAGCAACATCGCATTCTCTTTCCGATCGATCACTTCAAATGGAAGGTGCTTTTTCTGGCTTACCACCACCGTATTCCAGCGAGGCGGCACTGCGGCGAGCCCTTGAGAAGGAGCAAATCCGCCGAGAAATTTTGCGGCGGATGGAATTGGAGGAAGAAGTGAGGAGGGAACTTGAAATCGAGAGAGAATTGGGGATTTCAATACCGAGGCCGCTGAATATTCAAGGACTACTGTCGCAGTGGTTAAATTCAACGGCGATGAACCCGGTTGCTGTTGGCCATATCGGTGCGTCACAACCACCATTGATTCTGCCTCCCACGGAAATCAACCCTTCCTCGGAGATCAGTGACAAGGACAAAGTTATAGTGTTGGCTAGACCAGATCCCGAACTCTATAACGCAAAGCGAAAAGCAACGACATTGCCTTCTGCATTTGATTTGAAGAAAAAACAGAAGGAAGAGTGGAGTTGTGCACTGTGTGAGATTAAAGCCACAAGTGAGAGTGGTTTGAATGCTCATCTGAATGGTAAGAAGCACAAGATCAAGGAAGCTAGACAAAATAAAAAGATTTGCAAGAACAAGAAAGGAAGTGAAATTTTTGTGAAAGTGAAGGCTACTAAAACAGTGGATACAATGATGATTCATAAAAGTGAAAATGAATCTAAAGATAAGGATGAACTGGTGGAAAGTAAGGACGATAATAACCTAAGTGTAAAAAAATTAAAATATGAGAAGAAGCCTATGGAGATGATGGTTGATAAAAATGCAACAAAATGTGAAAAGGGGGAGCTGCATATAGAGAAAAGCCAATGTTTGGAAAGTATTCAAGACACTCAGGAATCAGGAAAGGATGAACGTTTGTCAAACTAA 909 0.4257 MEFKYRAVDSVKPTATSHSLSDRSLQMEGAFSGLPPPYSSEAALRRALEKEQIRREILRRMELEEEVRRELEIERELGISIPRPLNIQGLLSQWLNSTAMNPVAVGHIGASQPPLILPPTEINPSSEISDKDKVIVLARPDPELYNAKRKATTLPSAFDLKKKQKEEWSCALCEIKATSESGLNAHLNGKKHKIKEARQNKKICKNKKGSEIFVKVKATKTVDTMMIHKSENESKDKDELVESKDDNNLSVKKLKYEKKPMEMMVDKNATKCEKGELHIEKSQCLESIQDTQESGKDERLSN* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0237 302 PANTHER OS06G0651300 PROTEIN-RELATED 1 269 - -
Psa4g0237 302 Coils Coil 46 74 - -
Psa4g0237 302 SUPERFAMILY beta-beta-alpha zinc fingers 152 200 IPR036236 -
Psa4g0237 302 PANTHER OS06G0651300 PROTEIN 1 269 - -
Psa4g0237 302 MobiDBLite consensus disorder prediction 283 302 - -
Psa4g0237 302 Gene3D Classic Zinc Finger 147 200 - -
Psa4g0237 302 SMART ZnF_U1_5 165 199 IPR003604 GO:0003676|GO:0008270
Psa4g0237 302 Coils Coil 187 207 - -
Psa4g0237 302 Pfam Zinc-finger of C2H2 type 168 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0237 Psa-Chr4 11344177 11346279 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0237 168 198 C2H2 Transcription Factor Family AT2G19380 61.290 4.33e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0237 - - mtr:MTR_4g130690 202.601