Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0209 ATGTCTATTAGAAAACCCCCATTCCCTCGACTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCCCAACAAATTCTGTCTCATGTGAATGTCTCTCTTCATGATGGAGGTGCACTTGTCCTAACAGGTGCAAATGGCTCAGGAAAGACAACTTTCATGCGCATGCTAGCTGGGTTTTCTCGTCCTTCTGCAGGCGAAATCCTTTGGAATGGCCATGATATTCAAAAATCTTTGATCTTCCAACAGTATAAGCTTCAGCTTAACTGGGTCTCCCTCAAGAGCGCAATTAAAGAAAAGTTCACTGTTCTAGAAAACATTCAGTGGTTTGAACTTCTTGAAGGCAAACAAGGGAAAGCCATGCCTGCACTTGAGTTGATGGGACTAGGAAGATTGGCTAAGGAAAAACCAAAGATGCTTTCAAGTGGCCAGCAGAGAAGATTGCAACTTGCCAGACTGCTCGCAATTGATCGCCCCATATGGTTGCTAGACGAGCCTTCAGTTGCATTAGATGATGAAGGTGTAAAGTTACTCGAGTACATTATTGCAGAACACAGGAAACAGGGAGGAATCGTGATTGTGGCGACTCATTTACCCATTGAGATAGAAGATTCCATGGTCTTGAGGCTGCCACCAAGGTTTCCAAGGAGGATGACATTAGAGGATATGCTTGGCCGCATGGATATTAGTTAA 690 0.4406 MSIRKPPFPRLLLNNVSCMRNAQQILSHVNVSLHDGGALVLTGANGSGKTTFMRMLAGFSRPSAGEILWNGHDIQKSLIFQQYKLQLNWVSLKSAIKEKFTVLENIQWFELLEGKQGKAMPALELMGLGRLAKEKPKMLSSGQQRRLQLARLLAIDRPIWLLDEPSVALDDEGVKLLEYIIAEHRKQGGIVIVATHLPIEIEDSMVLRLPPRFPRRMTLEDMLGRMDIS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0209 229 ProSitePatterns ABC transporters family signature. 139 153 IPR017871 GO:0005524
Psa4g0209 229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 228 IPR003439 GO:0005524
Psa4g0209 229 SMART AAA_5 35 223 IPR003593 -
Psa4g0209 229 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 13 209 IPR005895 GO:0017004|GO:0022857
Psa4g0209 229 Gene3D - 8 209 IPR027417 -
Psa4g0209 229 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Psa4g0209 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 203 IPR027417 -
Psa4g0209 229 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 9 223 IPR005895 GO:0017004|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0209 Psa-Chr4 10346837 10347526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0209 24 207 Calmodulin-binding Proteins AT2G36910 26.633 3.41e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0209 - - cpap:110815669 394.815