Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0172 ATGGAGTTAAATGGCACTGACAGAGTTTACGCCCTTCACGTTGAAGCACAACCGAAGCCAAGCCCTCTCCGTAAAATGTTAGCAGTCGCCTCCATTGCCGCCGGGATACAATTCGGCTGGGCTCTCCAGCTCTCTTTACTCACTCCATACATCCAGCTCCTCGGAGTACCTCATAAGTGGGCAGCCAATATCTGGCTATGCGGTCCCATCTCCGGCTTGATCGTTCAGCCAATTGTAGGATACTACAGCGACCGATGCCGTTCTCGCTTCGGTCGCCGTCGTCCTTTCATCTTCTTCGGCGCATTATCCGTTGCAACCGCCGTCTTCCTTATCGGCTACGCAGCCGATTTTGGACGCTCTTTAGGCGACGATATCACGAAGAAAACTCGTCCACGTGCTGTTGTTATCTTTGTGTTAGGGTTTTGGATACTTGACGTTGCTAATAACATGCTTCAAGGACCTTGCCGTGCTTTCCTCGGTGACCTGGCAAACGGTGATCACCGTCGAATGAGAACCGGTAACGCGTTCTTCTCGTTCTTCATGGCCGTCGGTAATGTTCTAGGTTATGCTGCTGGCTCCTACAGTAAACTCCATAACATTTTCCCTTTCGCCGAAACCAAAGCTTGCGATGTGTTTTGCGCCAATCTCAAAACCTGTTTCTTCTTCTCCATTATTCTCCTCGCCGCAGTTTCTGCTTTTGCTCTTCTCTACGTAGAAGACACTCCAATAGAATCAACACAAACCAAATCACAATTGGAAGAAGACAAAAACGATTCTTGTTTTGGCGAGTTACTAGGTGCTTTCAATGGCCTCGAGAAGAAGATGTGGATGTTGATGTTGGTAACCGCCATAAACTGGATAGCATGGTTCCCTTTCTTCTTGTTCAACACTGATTGGATGGGCCGTGAAGTGTATGGTGGCGATGTCGGTGAAAAACTTTACGACGCCGGTGTGCGTGCGGGTGCGTTGGGGCTCATGATTAATGCGGTTGTGCTTGCTGTAATGTCGTTGGCGGTTGAACCGTTGAGCCGTTTGGTTGGTGGAGCTAAGAGATTATGGGGAATCGTTAATATTATTCTCGCTCTTGCGATGGTTATGACGGTTATCATCACCAAAGCGGCGCAGCATGAACGCCGTGTCAGTGGCGGTGGCGCACCGTCTACCGGTATTAAAGCTGCAGCATTCATTTTCTACGCCATTAATTTCAGTGTACCATTTGCTTTAGCATCTATTTACTCTACCTCATCAGGAGCAGGGCAAGGTTTATCTTTGGGAGTCCTTAACATTTCAATTGTTGTTCCACAGATGATAGTATCACCATTAAGTGGACCCTGGGATTCGTTGTTTGGTGGTGGCAATTTACCTGCATTTGTTGTGGGTGCTGTGGCGGCAGTCATGAGTAGTATTCTGGCAATTGTTCTTTTACCTACTCCGAAGCCAGCCGATATTGCCAAAGCTTCAGCTGCCACCCCCGGTGGTTTTCATTAA 1488 0.4832 MELNGTDRVYALHVEAQPKPSPLRKMLAVASIAAGIQFGWALQLSLLTPYIQLLGVPHKWAANIWLCGPISGLIVQPIVGYYSDRCRSRFGRRRPFIFFGALSVATAVFLIGYAADFGRSLGDDITKKTRPRAVVIFVLGFWILDVANNMLQGPCRAFLGDLANGDHRRMRTGNAFFSFFMAVGNVLGYAAGSYSKLHNIFPFAETKACDVFCANLKTCFFFSIILLAAVSAFALLYVEDTPIESTQTKSQLEEDKNDSCFGELLGAFNGLEKKMWMLMLVTAINWIAWFPFFLFNTDWMGREVYGGDVGEKLYDAGVRAGALGLMINAVVLAVMSLAVEPLSRLVGGAKRLWGIVNIILALAMVMTVIITKAAQHERRVSGGGAPSTGIKAAAFIFYAINFSVPFALASIYSTSSGAGQGLSLGVLNISIVVPQMIVSPLSGPWDSLFGGGNLPAFVVGAVAAVMSSILAIVLLPTPKPADIAKASAATPGGFH* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0172 495 Gene3D MFS general substrate transporter like domains 19 477 IPR036259 -
Psa4g0172 495 TIGRFAM GPH_sucrose: sucrose/H+ symporter 22 479 IPR005989 GO:0005887|GO:0008515|GO:0015770
Psa4g0172 495 CDD MFS_SLC45_SUC 26 454 - -
Psa4g0172 495 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 14 482 - -
Psa4g0172 495 SUPERFAMILY MFS general substrate transporter 24 480 IPR036259 -
Psa4g0172 495 PANTHER SUGAR TRANSPORTER 14 482 - -
Psa4g0172 495 Pfam MFS/sugar transport protein 32 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0172 Psa-Chr4 8631855 8634186 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0172 7 495 Sucrose Transporter Gene Family AT1G71890 60.827 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0172 K15378 - gmx:100785359 702.59