Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0137 ATGCGTTATGTGTCCTTAATGCAACAGAATCAAAGAAATGAAGCCTCTGAAAGTGAGACTGTGAATGGAAAAGCTGAGGGAGGAGATGCTGTGATGGCTAGAAAGTTTGTGACTGGTTCTTCGTCAGAAGTAGTTGATCCAAAAGTATTGAATTCTCCTATTTCGGATGAAAGAAAGCGATCGAGATCGCCCCGGAACAACAATAAAACGGATCAGAAAGAGACTGATCCAGATTCAACCGATCAACTGGTACAAGTTTGGGAGCCAAATAAGGTTCCAAGATTAAACCCCTCCAATGCTTCTGATCAAGCTGCTGCAGAAGCTACTATGAGAAAAGCGCGCGTCTCCGTCCGTGCCCGATCAGAAGCCCACATGATCAACGATGGCTGCCAATGGCGAAAGTATGGACAGAAAATGGCGAAGGGAAACCCTTGTCCTCGAGCATATTACAGATGCACAATGGCTGTTGGTTGCCCCGTTCGCAAGCAAGTTCAGCGTTGTGCTGAAGACAAAACAATTCTGATAACCACATATGAAGGGACACATAGTCATCCACTGCCACCCGCTGCTATGCCGATGGCGTCGACCACCGCGGCTGCTGCCACGGTGTTACTATCTGGATCAATGTCAAGTGCTGATGGGGTGGTGAACCCAAATTTACTATCTAGAATTCTTCCTAATTGCTCTTCTAGCATGGCCACACTCTCAGCAACAGCACCATTTCCTACTGTCACACTAGACCTTACACATGACAGCACAGATAACAATAATAACCAAAATTCTCATTCCCAATTTCAACTTGGACAGCCTCAAAACTTTGGATCAGGACAATTACCACAGGTCATTGCACAAGCACTCTATAACCAATCCAAATTCTCTGGCCTTCAACTCTCTCAAGATGTTGGAGGCTCTTCCCAATTGCACTCAACTCAACAAGCTTCATCACTCAGCGCTGCCATCACCGCCGATCCAAACTTCACCGCAGCAATCGCGGCCGCTATCTCCACCATAATTGGCGGTGGTTCTCCCAACAACAACAACAACAACAACAATCCTAATATCCTCAACAGTGCTGCCTACAATCAGTAG 1089 0.4646 MRYVSLMQQNQRNEASESETVNGKAEGGDAVMARKFVTGSSSEVVDPKVLNSPISDERKRSRSPRNNNKTDQKETDPDSTDQLVQVWEPNKVPRLNPSNASDQAAAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSHPLPPAAMPMASTTAAAATVLLSGSMSSADGVVNPNLLSRILPNCSSSMATLSATAPFPTVTLDLTHDSTDNNNNQNSHSQFQLGQPQNFGSGQLPQVIAQALYNQSKFSGLQLSQDVGGSSQLHSTQQASSLSAAITADPNFTAAIAAAISTIIGGGSPNNNNNNNNPNILNSAAYNQ* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0137 362 Pfam WRKY DNA -binding domain 127 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g0137 362 MobiDBLite consensus disorder prediction 52 78 - -
Psa4g0137 362 MobiDBLite consensus disorder prediction 1 20 - -
Psa4g0137 362 MobiDBLite consensus disorder prediction 90 105 - -
Psa4g0137 362 PANTHER WRKY TRANSCRIPTION FACTOR 31-RELATED 1 351 - -
Psa4g0137 362 ProSiteProfiles WRKY domain profile. 121 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g0137 362 MobiDBLite consensus disorder prediction 90 109 - -
Psa4g0137 362 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 351 IPR044810 GO:0003700
Psa4g0137 362 MobiDBLite consensus disorder prediction 1 82 - -
Psa4g0137 362 Gene3D WRKY domain 111 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa4g0137 362 SUPERFAMILY WRKY DNA-binding domain 119 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa4g0137 362 SMART WRKY_cls 126 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0137 Psa-Chr4 6148680 6151084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0137 1 350 WRKY Transcription Factor Family AT1G62300 52.926 2.48e-103 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa4g0137 WRKY 5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0137 - - mtr:MTR_4g132430 481.1