Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0129 ATGTCTCCAAACAAAGCCTTCATCTTCTTAGCTCTCTTATCCTTTTCACCACAACTTTTCCTAACAATCTCTTCTGCTGTAGAAGATAACGGCCTTCTCTTAAACTACTACAAAGAATCATGTCCACAAGCTGAAGAAATCATCAAAGAACAAGTCAAACTTCTCTACAAACGCCACAAGAACACCGCTTTCTCATGGCTCAGAAACATTTTCCATGACTGTGCTGTTCAGCTAGGAGGTCCTTATATTCCATTGAAAACCGGAAGAAGAGATGGAAGAAAGAGCAGAGTGGATCTGTTGGAGGCGTACCTTCCTGATCACAATGAATCTATTTCTTCTGTTCTTGACAAGTTCGGTGCCATGGGAATCGACACTCCTGGAGTTGTTTCTTTGCTGGGAGCACACAGTGTTGGTAGAACTCATTGCACAAAACTGGTGCACCGTTTATATCCAGAAGTTGATCCAGCTTTGAATCCAGATCACATTCCACACATGCTAAAGAAGTGTCCTGATTCAATCCCTGACCCTAAGGCAGTACAGTACGTGAGAAATGACCGTGGTACCCCCATGATTCTTGATAACAATTACTATAGAAATATTCTCGACAACAAGGGTCTTTTAATAGTGGATCATCAACTAGCACATGACAAAAGGACAAAACCTTATGTGAAGAAAATGGCCAAAAGTCAAGACTATTTCTTCAAGGAGTTTTCTAAAGCTATTACATTGCTTTCTGAGAATAATCCTCTAACCGGTACTAAAGGTGAGATTAGAAAACAGTGCAGTGTTGCTAACAAACAACGCCATGATGAGCCTTGA 819 0.409 MSPNKAFIFLALLSFSPQLFLTISSAVEDNGLLLNYYKESCPQAEEIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQLGGPYIPLKTGRRDGRKSRVDLLEAYLPDHNESISSVLDKFGAMGIDTPGVVSLLGAHSVGRTHCTKLVHRLYPEVDPALNPDHIPHMLKKCPDSIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLAHDKRTKPYVKKMAKSQDYFFKEFSKAITLLSENNPLTGTKGEIRKQCSVANKQRHDEP* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0129 272 SUPERFAMILY Heme-dependent peroxidases 32 265 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa4g0129 272 ProSiteProfiles Plant heme peroxidase family profile. 73 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g0129 272 Gene3D - 32 76 - -
Psa4g0129 272 Gene3D - 77 265 - -
Psa4g0129 272 PANTHER PEROXIDASE 42 76 264 - -
Psa4g0129 272 PANTHER PEROXIDASE 42 25 76 - -
Psa4g0129 272 Gene3D Peroxidase, domain 2 105 244 - -
Psa4g0129 272 PRINTS Plant ascorbate peroxidase signature 79 91 IPR002207 GO:0004601|GO:0006979|GO:0020037
Psa4g0129 272 PRINTS Plant ascorbate peroxidase signature 121 142 IPR002207 GO:0004601|GO:0006979|GO:0020037
Psa4g0129 272 Pfam Peroxidase 77 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g0129 272 PANTHER PEROXIDASE 25-RELATED 76 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g0129 272 PANTHER PEROXIDASE 25-RELATED 25 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0129 Psa-Chr4 5670340 5672482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0129 78 266 Peroxidase AT4G21960 84.127 3.91e-122 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0129 K00430 - gmx:547513 373.244