Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0107 ATGAAAGCCTCAAAGCAACAAAGACGATGCAAAGCCTTGTGTTGTAGTAGCAACAGGTTTAGTGTCTCTTCTTCAGAAGAACCAGAGAGTTCTTCTTCTTCTTCAATCTCTGATAGGTTCCCTTCTGTTTCTACACTAGCACATGCCATGGTGCAAGAGAGACTTGACCAAATGATTAGAGAAAAGCTTGAAACTAGACATGTAGAGAGAAAAATGGAGAAGAAAAGAGAAGAAACTAAGTTTGTTGTAATGTTAGCTATGGAGAAATGTTCTTATGATCCTAGAGAGGATTTTAGGGAATCAATGATGGAGATGATAACCGTGAATCGCCTTCGAGACGCGAAAGATCTTCGAAGTTTATTGAACTATTATATGTCCATGAATTCGGATGAATATCATAGTCTTATACTTGAGATTTTTCATGAGGTTTGTACTAATTTGTTCTTATCATGTAAATGCAAATGGTAA 468 0.3654 MKASKQQRRCKALCCSSNRFSVSSSEEPESSSSSSISDRFPSVSTLAHAMVQERLDQMIREKLETRHVERKMEKKREETKFVVMLAMEKCSYDPREDFRESMMEMITVNRLRDAKDLRSLLNYYMSMNSDEYHSLILEIFHEVCTNLFLSCKCKW* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0107 155 PANTHER TRANSCRIPTION REPRESSOR-RELATED 7 149 - -
Psa4g0107 155 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 86 148 IPR006458 -
Psa4g0107 155 MobiDBLite consensus disorder prediction 19 38 - -
Psa4g0107 155 Pfam Transcriptional repressor, ovate 91 148 IPR006458 -
Psa4g0107 155 ProSiteProfiles OVATE domain profile. 87 146 IPR006458 -
Psa4g0107 155 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 149 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0107 Psa-Chr4 4840963 4841642 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Psa4g0107 Ovate 9.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0107 - - var:108330150 192.971