Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0102 ATGATCATAAGAAATGCATCAAAGGAACATGAAAAGCACTTATTGGAATCTCACATCATGCTTCTACAAAGCACTTTGGAGAATGGAAGCTACAACAAACTCCACAGTTTCAAACACATAATCAATGGCTTCTCTGTCCACACAACTCCTTCTCAGGCGAAAAGACTCAAAGCTACACCGGGAGTGAAGTTGGTAGAGAAAGATAGAGGAGTGAAGAAAATGACAACATATACTCCTGATTTTCTTGACTTACCACAAGGAGTATGGGCAGAAGGAGGAGGTGACAAAAATGCAGGTGATGGAGTTGTTATTGGTGTTATTGATAGTGGCATTAATCCAGTTCATCCAAGCTTTGGTTCGCAAACTTTCGCTACAAATATATCTCACTTTTCTGGTGCTTGTGAGACTGGTCCACACTTTCCACCTGAATCTTGCAATGGAAAGATTGTTTCAGCTAAATATTTCTCAGCTGGGGCTCAAGCTTCTGCTAAATTTAATGCTTCTGTTGATTTTCTTTCACCTTTTGATGCAGATGGACATGGCAGTCATGTGGCATCTATTGCTGCTGGAAATGCTGGTGTTCCTGTTGAAGTCAATGGTTTTTGTTACGGGCGAGCCAGCGGAATGGCACCACGCGCAAGGATTGCTGTTTATAAAGCTATCTACTCATCCGTGGGAACTATGGCAGATGTTGTTGCAGCTATAGATCAAGCTGTACAAGATGGAGTAGATATCATATCACTCTCTATTGGACCAAATGGACCAACACAAGATACATTAACATTTCTCAGCGTCTTTGATATTTCTCTATTATTTGCAAGAAAAGCTGGAGTTTTAGTGGTTCAAGCTGCAGGTAATAATGGTCCATCATCTTCAAGTGTTGTATCATTTAGTCCATGGACTGTCGGCGTTGCCGCTTGCAACACAGACAGAAGATATACTTCTTCAATTCTTCTTGGAAACGGCCAAATAATTGACGGCGTTGGACTATCAGGACCAAGTTTTGGAAATGGGACAGTTCTCCGTAAACTTGTATTAGCTAAGGATGCAGTAAAAGTAAATACAACATTTCCAATGACACCAGAGTACTTAGAAGAGTGTCAGCATCCAGAAGCTTTGGATCCTATTAAAGTGTTTGGAAGTGTCATAATCTGCAATTTCTCTGAAGGATTCCTTAATGGAACCTCAACAATTGCTGGCATTATCAGCTCCGCCAAGGCTCTGGGATTCGAGGGTTTTATTCTGACTGCGAATCCAAGCTACGGCGATTATATTGCAGAGCCAATTCCTTTTCCTATTCCTGGTATCTTGATTCCTTCTGTGGCTGATACCAAGGCTATCGAGAAATATTATGAAGAATGGACAAAGAGGGACGAGAAAGGAACTGTTACGGAATTTGGCGCTATGGCATCTAAAGCGGAAGGAAGGGTTGCCTCGTTCAAAGGCCGATCACCGGTCGTTAGTAGATTTTCGTCGAGAGGTCCAGATATCATTGATGCAAAGAAAAATCTTGCTGATGTACTTAAACCTGATATTCTAGCTCCAGGGCACCAAATATGGGCTGCATGGAGCCCTATTAGCGCCAAACAACCTATGCTAACAGGACATGATTTTGCATTATTATCTGGTACCAGCATGGCAGCGCCTCACGTGGCTGGAATCGCGGCTCTGATCAAGCAATATAATCCATCATGGAGTGCATCTATGATAGCATCTGCAATCACCACAACTGGCACAAAGTATGACAATCTGGGCGAGCCTATGATGGCCGAAGGCTATGAGGTCAACACATTGCGTCCATCCACTCCTTTTGATTTTGGGGCGGGCATTGTAAACCCTAGTCGTGCCATCGATCCCGGCTTGGTGCTATCATCAGATTTTCAAGACTTCATCAGCTTCTTGTGCTCTTTACCAAACATCGATCCGAGTACAATAACAACAGCAACAGGAGAACCTTGCAACAACCCATTTGATTATCCATCTAGTTTAAACCTTCCATCAGTGACAATTTCTGCACTGAAAGGATCAATTTCTGTGAGAAGAACTGTGATGAATGTAGGGAACACCACAGAGACATACTTGGGGTCTGTTCTACCTCCTAATGGAACTTCAATTAACTTGAATCCAACTTGGTTTACCATAAGTCCACAAGGAACGCAAGATCTGGAAATAAACATCAATGTGAATCAACCAATGGAGAATTTTAGCTTTGGTGAAATTGTTTTGACAGGAAGTTTGGATCACATAGTAAGAATAACTTTGTCGGTTGTGCCCGTTTCAGTAGAGCAACATAAATTGTAA 2301 0.422 MIIRNASKEHEKHLLESHIMLLQSTLENGSYNKLHSFKHIINGFSVHTTPSQAKRLKATPGVKLVEKDRGVKKMTTYTPDFLDLPQGVWAEGGGDKNAGDGVVIGVIDSGINPVHPSFGSQTFATNISHFSGACETGPHFPPESCNGKIVSAKYFSAGAQASAKFNASVDFLSPFDADGHGSHVASIAAGNAGVPVEVNGFCYGRASGMAPRARIAVYKAIYSSVGTMADVVAAIDQAVQDGVDIISLSIGPNGPTQDTLTFLSVFDISLLFARKAGVLVVQAAGNNGPSSSSVVSFSPWTVGVAACNTDRRYTSSILLGNGQIIDGVGLSGPSFGNGTVLRKLVLAKDAVKVNTTFPMTPEYLEECQHPEALDPIKVFGSVIICNFSEGFLNGTSTIAGIISSAKALGFEGFILTANPSYGDYIAEPIPFPIPGILIPSVADTKAIEKYYEEWTKRDEKGTVTEFGAMASKAEGRVASFKGRSPVVSRFSSRGPDIIDAKKNLADVLKPDILAPGHQIWAAWSPISAKQPMLTGHDFALLSGTSMAAPHVAGIAALIKQYNPSWSASMIASAITTTGTKYDNLGEPMMAEGYEVNTLRPSTPFDFGAGIVNPSRAIDPGLVLSSDFQDFISFLCSLPNIDPSTITTATGEPCNNPFDYPSSLNLPSVTISALKGSISVRRTVMNVGNTTETYLGSVLPPNGTSINLNPTWFTISPQGTQDLEININVNQPMENFSFGEIVLTGSLDHIVRITLSVVPVSVEQHKL* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0102 766 CDD PA_subtilisin_like 316 451 - -
Psa4g0102 766 Gene3D Peptidase S8/S53 domain 101 630 IPR036852 GO:0004252|GO:0006508
Psa4g0102 766 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 104 115 IPR023827 -
Psa4g0102 766 Gene3D - 310 478 - -
Psa4g0102 766 SUPERFAMILY Protease propeptides/inhibitors 25 71 - -
Psa4g0102 766 Pfam Fibronectin type-III domain 663 756 IPR041469 -
Psa4g0102 766 Pfam Subtilase family 99 581 IPR000209 GO:0006508|GO:0008236
Psa4g0102 766 PRINTS Subtilisin serine protease family (S8) signature 99 118 IPR015500 -
Psa4g0102 766 PRINTS Subtilisin serine protease family (S8) signature 176 189 IPR015500 -
Psa4g0102 766 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Psa4g0102 766 SUPERFAMILY Subtilisin-like 74 621 IPR036852 GO:0004252|GO:0006508
Psa4g0102 766 CDD Peptidases_S8_3 71 577 IPR034197 -
Psa4g0102 766 Pfam Peptidase inhibitor I9 8 72 IPR010259 -
Psa4g0102 766 Gene3D - 634 758 - -
Psa4g0102 766 PANTHER SUBTILISIN-LIKE PROTEASE SBT2.6 10 752 - -
Psa4g0102 766 ProSitePatterns Serine proteases, subtilase family, histidine active site. 180 190 IPR022398 -
Psa4g0102 766 ProSiteProfiles Serine proteases, subtilase domain profile. 79 617 - -
Psa4g0102 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 10 752 IPR045051 -
Psa4g0102 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 73 IPR037045 -
Psa4g0102 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0102 Psa-Chr4 4555849 4562549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0102 12 756 Subtilisin-like Serine Gene Family AT1G62340 62.517 0.0 957
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0102 - - gmx:100798915 1115.14