Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0071 ATGGGAAATGTGAACGCTAATCCTTCCGAACAAGATGAACCACCTTTTTCCCCCACCGCGCCGGTGAACGGAGATTTAACCGATAACGCCATGATGACTCACTCTCCTCCCACAACCCCTAGAGCCACTCATTCTCCACTCATCTTCACTCCTCAAGTTCCTGTTGTTCCTTTACAAAGACCTGACGAGATGCATCACACTCATTCATGGACTCAAACTACTTCTGGTTATGAAGATATTTACACTCAACACACTATTCCAACTTTGATTACTTGGAATTATGGTGGTAAACATGTTTCTGTTGAGGGATCTTGGGATAATTGGAAATCAAGAACTCCATTGCAGAGATCAGGTAAAGACTTCACAATATTGAAGGTACTTCCCTCTGGTGTTTACCAGTATAGATTTGTTGTTGATGGAAGATGCAGTTACGCTCCGGATTTGCCTTGGGAACGAGATGAAGCTGGGAATTCGTACAATGTCTTGGACTTGCAGGATTATGTTCCTGAAGACATTGGAAGCATTTCTGGTTTTGAACCTCCTCAATCACCAACCTCAAGTTACGATAATTCACAACTTAGTTCTGAAGATTACGCGAAGGAACCACCATTAGTTCCTCCCCACTTTGCAACTACCCTGCTAAATGTGCGGACAACAAACATGGACATCCAACCTCCTATGCCAAGACCTCAACATGGAGTGCTCAATCATCTTTACATGCAGAAAGAAAAGAGTAGTAACTCAGTGGTTGCCCTTGGTACAACACATCGTTATCTGGCCAAATATGTCACTGTGGTGCTTTACAAGTCTTTGCAGACGTAA 822 0.4331 MGNVNANPSEQDEPPFSPTAPVNGDLTDNAMMTHSPPTTPRATHSPLIFTPQVPVVPLQRPDEMHHTHSWTQTTSGYEDIYTQHTIPTLITWNYGGKHVSVEGSWDNWKSRTPLQRSGKDFTILKVLPSGVYQYRFVVDGRCSYAPDLPWERDEAGNSYNVLDLQDYVPEDIGSISGFEPPQSPTSSYDNSQLSSEDYAKEPPLVPPHFATTLLNVRTTNMDIQPPMPRPQHGVLNHLYMQKEKSSNSVVALGTTHRYLAKYVTVVLYKSLQT* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0071 273 CDD E_set_AMPKbeta_like_N 87 163 - -
Psa4g0071 273 Gene3D - 176 271 - -
Psa4g0071 273 Gene3D Immunoglobulins 79 168 IPR013783 -
Psa4g0071 273 SUPERFAMILY AMPKBI-like 168 270 IPR037256 -
Psa4g0071 273 Pfam Glycogen recognition site of AMP-activated protein kinase 86 165 IPR032640 -
Psa4g0071 273 SMART AMPKBI_2 181 271 IPR006828 GO:0005515
Psa4g0071 273 MobiDBLite consensus disorder prediction 178 197 - -
Psa4g0071 273 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 272 IPR043554 -
Psa4g0071 273 SUPERFAMILY E set domains 84 165 IPR014756 -
Psa4g0071 273 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2 1 272 - -
Psa4g0071 273 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 199 269 IPR006828 GO:0005515
Psa4g0071 273 MobiDBLite consensus disorder prediction 178 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0071 Psa-Chr4 3553630 3556654 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0071 K07199 - gmx:100805688 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0071 4 3553630 3556654 Psa1g3947 1 323968326 323972584 PCT