Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0059 ATGGGAAGCGATGAGACTCAACAGTTATTGCTTTCAGAGCCAAGGGACCATTCTCATGTCAATGAGAAAACCGACCTTCTTCAGAGAAGACGAACGCGGCGAGGCCGCATTTCAGACACAGAGACCAATCTGTTGCAAGAACAGAATGTTAGCCTCCAAACCCCTTTAGACTCTCAATCCATAGACGAAACACAAGAAGCCGAACTCAATTTCAAGCCGGTTTTCTTGTTTTTAGCAGCATACTTAGGTACAGGCACCTTATGTTTCTTTCTCGCAAGTTACCAAATTCAAGGCATAAAAACAAATGGTTTTCTTGATGCTCTTTATTTCTGCGTCGTTACAATGACTACTGTTGGATACGGCGATCTCGTCCCTAACAGCACTATCGCGAAACTACTTGCTTGCCTTTATGTCTTCACTGGTATGGCTCTTGGTGGCTTAATTCTCAGCAAAGCAGCAGATTACGTTGTAGAAAAACAGGAAGTCTATCTTGTTAAAGCAATATGCAAAGCCGAGAAACTCGGTCTAGAAGAGGTTTCTAAAGAGCTTGTAACTAAGAAAAGCAAATACAAGTTTCTGCTTTCAGCGTCCACTTTTGTTGTACTCATGATTGTAGGAACTGCTTTTCTGTATTTTGTTGAGAAGCTAGATTTCGTCGACGCGTTCTATTGTGTTTGTTCGACTGTAACTACTTTAGGTTATGGTGATAAGAGCTTCTCAACTGCTATTGGTAGGACTTTTGCTGTGTTTTGGATATTGAGTAGCACCATTTGCTTGGCTCAGTGTTTTGCATATCTTGCTGATTTTTATACCGAAGATAGGCAAAGATCTTTGGCGAAAATGGTTCTTACGCGAAAGTTTTCGCCCCGTGATCTTGAGGCAGCTGATCTTGACGGAGACAAAGCTGTCAGTGCTGCAGAGTTTGTTTTGTACAAGTTGAAGGAAATGGGAAAGATCAACCAAGAAGATGTTACAGCTGTGATGGAGCTTTTTAGAAAACTAGATTATGATCAATCAGGAACTCTGACTGAAGCTGATTTCAGAAATTCCGAAGTCTGA 1059 0.4145 MGSDETQQLLLSEPRDHSHVNEKTDLLQRRRTRRGRISDTETNLLQEQNVSLQTPLDSQSIDETQEAELNFKPVFLFLAAYLGTGTLCFFLASYQIQGIKTNGFLDALYFCVVTMTTVGYGDLVPNSTIAKLLACLYVFTGMALGGLILSKAADYVVEKQEVYLVKAICKAEKLGLEEVSKELVTKKSKYKFLLSASTFVVLMIVGTAFLYFVEKLDFVDAFYCVCSTVTTLGYGDKSFSTAIGRTFAVFWILSSTICLAQCFAYLADFYTEDRQRSLAKMVLTRKFSPRDLEAADLDGDKAVSAAEFVLYKLKEMGKINQEDVTAVMELFRKLDYDQSGTLTEADFRNSEV* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0059 352 Gene3D - 173 276 - -
Psa4g0059 352 MobiDBLite consensus disorder prediction 10 32 - -
Psa4g0059 352 PRINTS Two pore domain K+ channel signature 113 141 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa4g0059 352 PRINTS Two pore domain K+ channel signature 230 239 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa4g0059 352 Pfam Ion channel 199 271 IPR013099 -
Psa4g0059 352 Pfam Ion channel 79 157 IPR013099 -
Psa4g0059 352 SUPERFAMILY EF-hand 291 349 IPR011992 -
Psa4g0059 352 SUPERFAMILY Voltage-gated potassium channels 185 285 - -
Psa4g0059 352 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 18 347 IPR003280 GO:0005267|GO:0016020|GO:0071805
Psa4g0059 352 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Psa4g0059 352 ProSitePatterns EF-hand calcium-binding domain. 296 308 IPR018247 -
Psa4g0059 352 MobiDBLite consensus disorder prediction 1 32 - -
Psa4g0059 352 Gene3D - 292 350 - -
Psa4g0059 352 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 18 347 - -
Psa4g0059 352 SUPERFAMILY Voltage-gated potassium channels 71 158 - -
Psa4g0059 352 Gene3D - 68 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0059 Psa-Chr4 2694738 2696719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0059 53 346 Ion Channels AT5G55630 57.483 3.45e-119 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0059 K05389 - gmx:100799492 498.049