Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0050 ATGAAGTTCCACTATCTTTCATTGTTCCTTTTTGTGTTCATCTTGGAATTAAGCACCAATATCTATGGTGTTTCATCGCCAAAAAAATCTGTGAAACCTTTATTACCTGCTGAAGCTTTGCTTTCTATTAGTCACTATCATTCTACATGTCCAGATGCTGAAGGAGTTATCTCACAAAAAGTTGCTGCTTGGGTTAACAAGGACCCTACTTTGGCACCAGCCATCATCCGCTTGCATTTCCATGATTGCGCCGTTAGAGTAAGAGGACCATTTTGGGAAGTTCCATTCGGCCGAAAAGACGGAAAAATCTCGTTAACAAAAGAAGCAAATTTGGTTCCACAAGGACATGAAAACATAACAGGCTTACTTGCATTTTTCCAAGAAAGAGGACTTGACATGCTTGATTTGGTCACTCTTTCAGGCTCACACACAATTGGTAGAAGCACTTGTTATTCAATTATGAATAGGATTTACAATTTCAATGGAACTGGTAAACCTGATCCTTCACTTAGTGTCTATTACTTGAAGCTGTTGAGGAAAAGATGTAAAAAGGATTTGGATTTGGTGCATCTTGATGTTATAACACCAAGGACTTTTGACACAACATATTACAAGAATCTTGTGAGGAAAGTTGGTTTGTTGTCAACAGATCAATTGTTGTTTTCAGATGCAAGGACAGGTCCTTTTGTGGAAGCATTTGCAACACAACCTTTTCTTTTTGATAGTCAATTTTCTGTGTCAATGGTGAAGCTTGGGAATGTTCAAGTTTTGACTAGGCCTAATGAAGGTGAAATCAGAGTGAATTGCAATTATGTTAATCATGTTTGA 828 0.3768 MKFHYLSLFLFVFILELSTNIYGVSSPKKSVKPLLPAEALLSISHYHSTCPDAEGVISQKVAAWVNKDPTLAPAIIRLHFHDCAVRVRGPFWEVPFGRKDGKISLTKEANLVPQGHENITGLLAFFQERGLDMLDLVTLSGSHTIGRSTCYSIMNRIYNFNGTGKPDPSLSVYYLKLLRKRCKKDLDLVHLDVITPRTFDTTYYKNLVRKVGLLSTDQLLFSDARTGPFVEAFATQPFLFDSQFSVSMVKLGNVQVLTRPNEGEIRVNCNYVNHV* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0050 275 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g0050 275 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g0050 275 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g0050 275 Gene3D - 88 273 - -
Psa4g0050 275 CDD secretory_peroxidase 41 272 IPR033905 GO:0004601|GO:0042744
Psa4g0050 275 PANTHER PEROXIDASE 25-RELATED 26 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g0050 275 PANTHER PEROXIDASE 25-RELATED 88 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g0050 275 SUPERFAMILY Heme-dependent peroxidases 41 273 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa4g0050 275 ProSiteProfiles Plant heme peroxidase family profile. 75 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g0050 275 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g0050 275 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g0050 275 PRINTS Plant peroxidase signature 129 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g0050 275 Pfam Peroxidase 88 235 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g0050 275 Gene3D - 41 87 - -
Psa4g0050 275 PANTHER PEROXIDASE 26 86 - -
Psa4g0050 275 PANTHER PEROXIDASE 88 272 - -
Psa4g0050 275 ProSitePatterns Peroxidases proximal heme-ligand signature. 135 145 IPR019793 -
Psa4g0050 275 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Psa4g0050 275 Gene3D Peroxidase, domain 2 113 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0050 Psa-Chr4 1843810 1844926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0050 31 85 Peroxidase AT1G30870 45.455 5.68e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0050 K00430 - gmx:100792775 328.946