Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0037 ATGGTAAAATCACCACAATATGATAGATTTTCCAAGGATTTTGTAATGGGAGGCGCGGCGGCAATTATATCGAAGAGTGCAGTAGCGCCGATTGAGAGAGTGAAGCTTTTATTACAAAACCAAAGTGAAATGATTAAAAGAGGACAGCTCAAAAGACCATACCTGGGTGTGGCTAATAGCTTTAAGAGGGTCTTCGCGGAAGAGGGTCTGGTTGCCTTTTGGAGAGGTAATCAGGCCAATGTTATAAGATATTTCCCCACACAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATCTTTGGATATTCCAAAGAGAAAGACGGGTACATTAAGTGGTTTGCTGGGAATGTTGCTTCAGGCAGTGCTGCAGGAGCGACTACTTCAATGCTTTTGTATCATTTGGACTTTGCACGTACAAGATTGGCTACTGATGCTGTCGTGTGCCATGTTACTGGTCAGCGTCAGTTTAAAGGACTAATTGATGTATATCGTAAAACATTATCAAGTGATGGAATTGCTGGCTTGTACAGAGGATTTGGGGTTTCAATATTGGGAATCACCATGTATCGAGGGATGTACTTTGGGATCTATGACACCATGAAGCCTGTTGTTTTAGTTGGCGCTTTTGAGGGGAACTTCTTTGCTAGTTTCTTGTTAGGTTGGAGCATCACAACTGTATCTGGTGTCTGTGCATACCCTTTTGACACACTGCGGCGGCGTATGATGCTAACCTCCGGACACAAGATCAAGTATAATAATGCAATGCATGCATTTCGTGAGATTGTTGGACAAGAGGGTTTCTTAGCTCTATTTCGAGGAGTTTCCGCAAACATGCTTCTTGGAATGGCAGGAGCTGGGGTGCTTGCTGGGTACGATCAGCTAAACCGTATCTCATCTAGACACAGCAACAATAATGAAGCAAACCAAAGAGTTCTGAAATAA 948 0.4283 MVKSPQYDRFSKDFVMGGAAAIISKSAVAPIERVKLLLQNQSEMIKRGQLKRPYLGVANSFKRVFAEEGLVAFWRGNQANVIRYFPTQAFNFAFKGYFKSIFGYSKEKDGYIKWFAGNVASGSAAGATTSMLLYHLDFARTRLATDAVVCHVTGQRQFKGLIDVYRKTLSSDGIAGLYRGFGVSILGITMYRGMYFGIYDTMKPVVLVGAFEGNFFASFLLGWSITTVSGVCAYPFDTLRRRMMLTSGHKIKYNNAMHAFREIVGQEGFLALFRGVSANMLLGMAGAGVLAGYDQLNRISSRHSNNNEANQRVLK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0037 315 PRINTS Mitochondrial carrier protein signature 13 26 IPR002067 GO:0055085
Psa4g0037 315 PRINTS Mitochondrial carrier protein signature 26 40 IPR002067 GO:0055085
Psa4g0037 315 PRINTS Mitochondrial carrier protein signature 76 96 IPR002067 GO:0055085
Psa4g0037 315 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Psa4g0037 315 PRINTS Mitochondrial carrier protein signature 178 196 IPR002067 GO:0055085
Psa4g0037 315 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Psa4g0037 315 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 7 311 - -
Psa4g0037 315 Gene3D Mitochondrial carrier domain 11 304 IPR023395 -
Psa4g0037 315 PRINTS Adenine nucleotide translocator signature 10 22 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa4g0037 315 PRINTS Adenine nucleotide translocator signature 54 75 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa4g0037 315 PRINTS Adenine nucleotide translocator signature 87 99 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa4g0037 315 PRINTS Adenine nucleotide translocator signature 113 126 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa4g0037 315 PRINTS Adenine nucleotide translocator signature 218 234 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa4g0037 315 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 7 311 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa4g0037 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 101 IPR018108 -
Psa4g0037 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 205 IPR018108 -
Psa4g0037 315 SUPERFAMILY Mitochondrial carrier 8 296 IPR023395 -
Psa4g0037 315 Pfam Mitochondrial carrier protein 9 103 IPR018108 -
Psa4g0037 315 Pfam Mitochondrial carrier protein 114 205 IPR018108 -
Psa4g0037 315 Pfam Mitochondrial carrier protein 214 299 IPR018108 -
Psa4g0037 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 299 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0037 Psa-Chr4 1023604 1026946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0037 8 303 Antiporters AT5G17400 77.365 7.32e-169 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0037 K05863 - gmx:100798418 535.028