Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0028 ATGGATCAAGAGGAAGCCCCAAAACCCCCCAGAAGAATGACCAGGTTTTCAGCATCAACATCAACTTCAGATATTGTACATGCAACAAAAGGAAACAACCTTGAAACACGAACAATGAATGACCTTTTAGTTGGTGGGGACTCCATTAGCCTAGATGATATAATTGCCAGTTTTCCTGGTAGAAGTAGCCAAATTCTTGAGATCGCACGTCTTTTGGGACCGTTGAATTCACCGGTACTTCCTTTGTTTATGTATGGAGGTGCTTCTACTGGAAAAACTAGTATCATTCTTCAATTGTTTAGGCATCTCAACCGGCCTATTGTTTATTCTAGTTGTAGGACGTGTTATAATCAACGTATTTTGTTCGAGTCTGTTCTAAATCAGTTGCTTCTCCATAGAAAAAATGTTACCAATGCTTATACAAATGCTAAGCGCTGTGAAAGACCGTCTGATTTTGTCAATTTTCTTCGGGAAGCATTGACAAGTGTTATAAATAATCTGAAGGAGAAATCAGACAAGTTGGTCTCAGGAAATAAAATACACGGGGGAATGGGAAATATAATCTACTTAGTATTTGACAATTTTCATCTTGTTAGAGATTGGGATAAAAGCTCTACTATATTGCCCTTATTGTTTAATCTCTATGATATGCTAAAGATGCCAGAGGTTGGTCTGATTTTCATCAGTGGTACTTCCCCAGATACCTTTTACTCTAACATGGGTTATGTTGAGCCCATCCCCATTTACTTTCCTGATTACACTGAAGGTGATATCCGTCAAATACTATTGAGAAACCAAGCGAACCAGAAGTTGTTTTCTTCATTTCTCGACGTAGCTCTGAGGCCTTTCTGTAGAATTACTAGGCAGGTTGGTGAATTGTCTACTGCGTTAAAGCCACTATTTGAAAAATATTGCGAACCTTTAAGTGATAAGGGTAAAGGAGTTGTCCCTACTGAAGACATGAAGAGGAGGCTATTCAATCATATCAAGCCTCATATTGCCTCATCTCTGAATGATGTATTTAAGGTTTCGTCTCCTCCTGCAAGTAAAGTTAAGGTCGGTAAAGAGACAAAGCATAAGGGGAGTCCTAAGAGATCAGAGAGATTTGAGGAAATCGGTGATCTTGATTTTCATATGTCAACTAGTGCAAAGTATCTTCTTATTTCATCATTTCTTGCCTCCAGAAACCCTGCTACTCTTGATGCTTCACTTTTTGATTCCAAAGGTGGTTCTGATAATCGAAAGCGAAAGAGGAAGGCCTCCGAGAAAGTGCTGGAAAAGAAAGAAATTTTAGAAGAGGAACTACTAATGAAAGGACCTGGAACTTTCCCATTGGAGAGGTTGATAGCCATCTTTCAGTGTATTGTATCTGTTGCAGAAGAGCCATATGATGAAGAGGAACCAAACAACAATGAATTAGGAGCTGAATGTAGCAATGGTTCACTGATCTCTGACGTTCTTTTGCAACTATCCAGTCTCTGTAATGCTAATTTTATTTTCAAAGGAAAAAGCTGCCCAATTGAGGGCTCAACTCGGTATCGATCAACTATATCTGAAAACCTGGCCTTAAAGGTTGCAAGAAGCCTAAAGTTCCCACTGTCAAAATATTTGTACAGAAATTAG 1623 0.3894 MDQEEAPKPPRRMTRFSASTSTSDIVHATKGNNLETRTMNDLLVGGDSISLDDIIASFPGRSSQILEIARLLGPLNSPVLPLFMYGGASTGKTSIILQLFRHLNRPIVYSSCRTCYNQRILFESVLNQLLLHRKNVTNAYTNAKRCERPSDFVNFLREALTSVINNLKEKSDKLVSGNKIHGGMGNIIYLVFDNFHLVRDWDKSSTILPLLFNLYDMLKMPEVGLIFISGTSPDTFYSNMGYVEPIPIYFPDYTEGDIRQILLRNQANQKLFSSFLDVALRPFCRITRQVGELSTALKPLFEKYCEPLSDKGKGVVPTEDMKRRLFNHIKPHIASSLNDVFKVSSPPASKVKVGKETKHKGSPKRSERFEEIGDLDFHMSTSAKYLLISSFLASRNPATLDASLFDSKGGSDNRKRKRKASEKVLEKKEILEEELLMKGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNNNELGAECSNGSLISDVLLQLSSLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYRN* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0028 540 MobiDBLite consensus disorder prediction 348 367 - -
Psa4g0028 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 270 IPR027417 -
Psa4g0028 540 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 248 537 IPR020796 GO:0000808|GO:0005634|GO:0006260
Psa4g0028 540 Gene3D - 58 238 IPR027417 -
Psa4g0028 540 Coils Coil 414 434 - -
Psa4g0028 540 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 50 539 IPR020796 GO:0000808|GO:0005634|GO:0006260
Psa4g0028 540 MobiDBLite consensus disorder prediction 1 23 - -
Psa4g0028 540 Pfam AAA ATPase domain 58 214 IPR041664 -
Psa4g0028 540 MobiDBLite consensus disorder prediction 352 367 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g0028 3 539 Core DNA Replication Machinery Family AT4G29910 60.037 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0028 K02607 - gmx:100784340 823.157